RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PCK2Q16822 640 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 B3GNTL1Q67FW5 361 aaPredicted RBP11.93□□□□□ -0.5
NEK9-201ENST00000238616 SLC51BQ86UW2 128 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 OR52L2PQ8NGH6 319 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 OR4C3Q8NH37 302 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 TRAV34A0A0B4J273 112 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 FAM181BA6NEQ2 426 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 GPANK1O95872 356 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 GNG4P50150 75 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 RAB1AP62820 205 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 ETFDHQ16134 617 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 OR4S1Q8NGB4 309 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 RBPMSQ93062 196 aaKnown RBP11.93□□□□□ -0.5
NEK9-201ENST00000238616 PARD6AQ9NPB6 346 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 NDUFB11Q9NX14 153 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 OR1A1Q9P1Q5 309 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 TCFL5Q9UL49 500 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 U3KQ87 197 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 NCKAP5O14513 1909 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 IGHV3OR16-12A0A075B7B8 117 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 FAHP16930 419 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 ETFRF1Q6IPR1 90 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 SCGB1D4Q6XE38 83 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 ARL6IP6Q8N6S5 226 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 PELI1Q96FA3 418 aa11.93□□□□□ -0.5
NEK9-201ENST00000238616 CST7O76096 145 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 GSG1Q2KHT4 349 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 SLCO4C1Q6ZQN7 724 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 C11orf54Q9H0W9 315 aaPredicted RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 MYOZ1Q9NP98 299 aaPredicted RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 CBR3O75828 277 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 CA6P23280 308 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 RPL18Q07020 188 aaKnown RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 SELENBP1Q13228 472 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 TMEM56Q96MV1 263 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 CCDC187A0A096LP49 1063 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 A0A0A6YYJ9 748 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 E5RGE8 158 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 GFYI3L273 518 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 ATP1B1P05026 303 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 SPI1P17947 270 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 RPL30P62888 115 aaKnown RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 C1orf220Q5T0J3 134 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 LIPNQ5VXI9 398 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 LTB4R2Q9NPC1 389 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 NSG2Q9Y328 171 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 HELZP42694 1942 aaKnown RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 IGKV3D-15A0A087WSY6 115 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 GCGP01275 180 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 IGKV3-15P01624 115 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 SMAD4Q13485 552 aaKnown RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 SLC38A6Q8IZM9 456 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 F2RL2O00254 374 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 HTR1DP28221 377 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 POLR2IP36954 125 aaKnown RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 EMDP50402 254 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 NKAIN4Q8IVV8 208 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 FADS6Q8N9I5 356 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 NUP37Q8NFH4 326 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 LRP6O75581 1613 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 TCTAP57738 103 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 FCN2Q15485 313 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 VMA21Q3ZAQ7 101 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 GRAMD2BQ96HH9 432 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 GNRHR2Q96P88 292 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 TMUB1Q9BVT8 246 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 COL16A1Q07092 1604 aaPredicted RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 ABCA3Q99758 1704 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 RPL12P30050 165 aaKnown RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 ABHD17CQ6PCB6 329 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 AMMECR1Q9Y4X0 333 aaPredicted RBP11.92□□□□□ -0.5
NEK9-201ENST00000238616 R4GN57 208 aa11.92□□□□□ -0.5
NEK9-201ENST00000238616 KIAA1324LA8MWY0 1029 aaPredicted RBP11.91□□□□□ -0.5
NEK9-201ENST00000238616 FCGR3BO75015 233 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 CST5P28325 142 aaPredicted RBP11.91□□□□□ -0.5
NEK9-201ENST00000238616 GALR1P47211 349 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 FNDC7Q5VTL7 733 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 OR52N4Q8NGI2 321 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 TMED6Q8WW62 240 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 H7C2G1 150 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 HSBP1O75506 76 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 GNPNAT1Q96EK6 184 aaPredicted RBP11.91□□□□□ -0.5
NEK9-201ENST00000238616 ASB16Q96NS5 453 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 A4GNTQ9UNA3 340 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 POU3F3P20264 500 aaPredicted RBP11.91□□□□□ -0.5
NEK9-201ENST00000238616 GFERP55789 205 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 NAAAQ02083 359 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 DHRS13Q6UX07 377 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 ARRDC2Q8TBH0 407 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 ATP5SQ99766 215 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 RASL11BQ9BPW5 248 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 LOC285556D6RIA3 1793 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 SIX1Q15475 284 aaPredicted RBP11.91□□□□□ -0.5
NEK9-201ENST00000238616 MARCH1Q8TCQ1 289 aa11.91□□□□□ -0.5
NEK9-201ENST00000238616 NAA50Q9GZZ1 169 aaKnown RBP11.91□□□□□ -0.5
NEK9-201ENST00000238616 GDF2Q9UK05 429 aaPredicted RBP11.91□□□□□ -0.5
NEK9-201ENST00000238616 IGHV3-43A0A0B4J1X8 118 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms