RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 NCCRP1Q6ZVX7 275 aaPredicted RBP13.09□□□□□ -0.31
HDHD3-201ENST00000238379 TOMM5Q8N4H5 51 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 ACBD4Q8NC06 268 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 BORCS8Q96FH0 119 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 ZC3HAV1LQ96H79 300 aaKnown RBP13.09□□□□□ -0.31
HDHD3-201ENST00000238379 PAPOLGQ9BWT3 736 aaKnown RBP13.09□□□□□ -0.31
HDHD3-201ENST00000238379 PIGMQ9H3S5 423 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 GPR160Q9UJ42 338 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 SLC7A11Q9UPY5 501 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 MPIG6BO95866 241 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 CECR9P0C854 216 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 UCP2P55851 309 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 PPP1CBP62140 327 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 KLF9Q13886 244 aaPredicted RBP13.09□□□□□ -0.31
HDHD3-201ENST00000238379 GPR176Q14439 515 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 SLC22A6Q4U2R8 563 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 TIMM23BQ5SRD1 257 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 SPATA46Q5T0L3 261 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 MZT2BQ6NZ67 158 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 S100PBPQ96BU1 408 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 CPNE2Q96FN4 548 aaPredicted RBP13.09□□□□□ -0.31
HDHD3-201ENST00000238379 BANF2Q9H503 90 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 ING4Q9UNL4 249 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 CACNG2Q9Y698 323 aa13.09□□□□□ -0.31
HDHD3-201ENST00000238379 FUOMA2VDF0 154 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 TMEM8BA6NDV4 472 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 TMEM225BP0DP42 221 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 PRSS3P35030 304 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 PRDX4Q13162 271 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 ASCL4Q6XD76 172 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 MRGPRGQ86SM5 289 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 CDH24Q86UP0 819 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 LIX1LQ8IVB5 337 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 FTMTQ8N4E7 242 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 KDF1Q8NAX2 398 aaPredicted RBP13.08□□□□□ -0.32
HDHD3-201ENST00000238379 DUSP18Q8NEJ0 188 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 NICN1Q9BSH3 213 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 CST11Q9H112 138 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 ITPR1Q14643 2758 aa13.08□□□□□ -0.32
HDHD3-201ENST00000238379 A0A0A6YYD4 124 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 IGHV1-18A0A0C4DH31 117 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 EEF1E1-BLOC1S5C9J1V9 151 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 H7C417 338 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 LILRA1O75019 489 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 CRTAPO75718 401 aaPredicted RBP13.07□□□□□ -0.32
HDHD3-201ENST00000238379 SCGNO76038 276 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 VEGFCP49767 419 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 BCAP31P51572 246 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 ATP1B3P54709 279 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 ERVS71-1P61550 626 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 GUCA2AQ02747 115 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 DYRK1AQ13627 763 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 CELF2-AS1Q8N7Q2 184 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 BHLHE23Q8NDY6 225 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 OR10K1Q8NGX5 313 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 CMBLQ96DG6 245 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 CCDC120Q96HB5 630 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 DMRTA2Q96SC8 542 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 NUDT16L1Q9BRJ7 211 aaKnown RBP13.07□□□□□ -0.32
HDHD3-201ENST00000238379 OR2J1Q9GZK6 312 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 FGF23Q9GZV9 251 aaPredicted RBP13.07□□□□□ -0.32
HDHD3-201ENST00000238379 ZMAT3Q9HA38 289 aaKnown RBP13.07□□□□□ -0.32
HDHD3-201ENST00000238379 MTFP1Q9UDX5 166 aa13.07□□□□□ -0.32
HDHD3-201ENST00000238379 PQLC2LA1A4F0 135 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 SPRY1O43609 319 aaPredicted RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ANGPTL7O43827 346 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 CHRM2P08172 466 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 MGMTP16455 207 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 SLC6A1P30531 599 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 BTCP35070 178 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 RPS27AP62979 156 aaKnown RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 FAM27E3Q08E93 113 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 OR2T2Q6IF00 324 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ZDHHC23Q8IYP9 409 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 FAM89BQ8N5H3 189 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 OR1J1Q8NGS3 322 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 OR10R2Q8NGX6 335 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 SLC25A40Q8TBP6 338 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ENKURQ8TC29 256 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 GPX8Q8TED1 209 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 HPSE2Q8WWQ2 592 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 AQP3Q92482 292 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 SEH1LQ96EE3 360 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 S100A13Q99584 98 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 VKORC1Q9BQB6 163 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 MMP28Q9H239 520 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 MOV10Q9HCE1 1003 aaKnown RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 JKAMPQ9P055 326 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 POLEQ07864 2286 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ANKRD20A5PA0PJZ0 165 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 RBBP9O75884 186 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 ECDO95905 644 aaPredicted RBP13.06□□□□□ -0.32
HDHD3-201ENST00000238379 SFTPCP11686 197 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 RAC2P15153 192 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 PDZK1IP1Q13113 114 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 FAM189A2Q15884 450 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 CEACAM21Q3KPI0 293 aa13.06□□□□□ -0.32
HDHD3-201ENST00000238379 GLCCI1Q86VQ1 547 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms