RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ZNF793Q6ZN11 406 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 KDF1Q8NAX2 398 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 OR11G2Q8NGC1 345 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 MED29Q9NX70 200 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 OTX2P32243 289 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 RPS15P62841 145 aaKnown RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 HLA-CQ95604 372 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 CHST6Q9GZX3 395 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 PRAMEF20Q5VT98 475 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 CLEC18BQ6UXF7 455 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 SLC26A10Q8NG04 563 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 RGP1Q92546 391 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 TBC1D29Q9UFV1 150 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 IL17BQ9UHF5 180 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF107Q9UII5 783 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 PITPNC1Q9UKF7 332 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 LIPGQ9Y5X9 500 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 M0R135 149 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 HS3ST1O14792 307 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 DEGS1O15121 323 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 MUC1P15941 1255 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF121P58317 390 aaPredicted RBP12.38□□□□□ -0.43
HCFC2-201ENST00000229330 OR2C3Q8N628 320 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 SLC35G3Q8N808 338 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF799Q96GE5 643 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 Q9N2K0 584 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 ADAMTSL1Q8N6G6 1762 aa12.38□□□□□ -0.43
HCFC2-201ENST00000229330 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 FAM24AA6NFZ4 105 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 DVL1O14640 695 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 NAAAQ02083 359 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF92Q03936 586 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 MZT1Q08AG7 82 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 TIPARPQ7Z3E1 657 aaKnown RBP12.37□□□□□ -0.43
HCFC2-201ENST00000229330 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
HCFC2-201ENST00000229330 ICOSLGO75144 302 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 HSBP1O75506 76 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 AMER3Q8N944 861 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 FGF22Q9HCT0 170 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 MMP25Q9NPA2 562 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 LIN7CQ9NUP9 197 aaKnown RBP12.37□□□□□ -0.43
HCFC2-201ENST00000229330 BET1LQ9NYM9 111 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 DHCR7Q9UBM7 475 aaKnown RBP12.37□□□□□ -0.43
HCFC2-201ENST00000229330 TRBV23-1A0A0A0MS06 115 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 NXPH2O95156 264 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 PGA3P0DJD8 388 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 GDF1P27539 372 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 UBE2G2P60604 165 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 OR10A7Q8NGE5 316 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 MRM2Q9UI43 246 aaKnown RBP12.37□□□□□ -0.43
HCFC2-201ENST00000229330 SLC25A6P12236 298 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 OR4N2Q8NGD1 307 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 SLC25A43Q8WUT9 341 aaPredicted RBP12.37□□□□□ -0.43
HCFC2-201ENST00000229330 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
HCFC2-201ENST00000229330 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 PRRT4C9JH25 899 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 H3BQ15 152 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 MPPED1O15442 326 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 CDKN2AP42771 156 aaKnown RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 ERVS71-1P61550 626 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 ZNF813Q6ZN06 617 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 MAML2Q8IZL2 1156 aaPredicted RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 KTI12Q96EK9 354 aaPredicted RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 CLEC18AA5D8T8 446 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 AQP7O14520 342 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 WDR1O75083 606 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 ALOX12BO75342 701 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 OR10J4P0C629 311 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 CLEC18CQ8NCF0 446 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 NEU3Q9UQ49 428 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 PRAMEF25A6NGN4 478 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 NRASP01111 189 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 CD1CP29017 333 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 Q6ZNB5 142 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 FKBP11Q9NYL4 201 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 SIRT4Q9Y6E7 314 aaPredicted RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 UBE2L5PA0A1B0GUS4 154 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 MAP1LC3B2A6NCE7 125 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 VN1R1Q9GZP7 353 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 MAP1LC3BQ9GZQ8 125 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 FAM234AQ9H0X4 552 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 NAA60Q9H7X0 242 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 ST3GAL6Q9Y274 331 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 DMRT1Q9Y5R6 373 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 GEMIN2O14893 280 aaKnown RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 CMTM2Q8TAZ6 248 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 BAHD1Q8TBE0 780 aaPredicted RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 NT5CQ8TCD5 201 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 CIB3Q96Q77 187 aaPredicted RBP12.36□□□□□ -0.43
HCFC2-201ENST00000229330 GPA33Q99795 319 aa12.36□□□□□ -0.43
HCFC2-201ENST00000229330 B2MP61769 119 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 UBE2G1P62253 170 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 LAMTOR1Q6IAA8 161 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 RPS4Y2Q8TD47 263 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 ELSPBP1Q96BH3 223 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 CNTD2Q9H8S5 307 aa12.35□□□□□ -0.43
HCFC2-201ENST00000229330 PRR13Q9NZ81 148 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms