RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 MICU1Q9BPX6 476 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 PECRQ9BY49 303 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 MLXQ9UH92 298 aa14.29□□□□□ -0.12
LTBR-201ENST00000228918 TP53I11O14683 189 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 ACTL6AO96019 429 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 APOC1P02654 83 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 ADCYAP1P18509 176 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 EPHA8P29322 1005 aaPredicted RBP14.28□□□□□ -0.12
LTBR-201ENST00000228918 BLVRBP30043 206 aaPredicted RBP14.28□□□□□ -0.12
LTBR-201ENST00000228918 SLC6A9P48067 706 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 UBE2V2Q15819 145 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 NKAPLQ5M9Q1 402 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 NSUN5P2Q63ZY6 315 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 MRPL14Q6P1L8 145 aaKnown RBP14.28□□□□□ -0.12
LTBR-201ENST00000228918 FOXL2NBQ6ZUU3 175 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 PPP1R3BQ86XI6 285 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 GJC3Q8NFK1 279 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 TMED6Q8WW62 240 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 MAFIPQ8WZ33 124 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 AQP10Q96PS8 301 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 TM2D1Q9BX74 207 aa14.28□□□□□ -0.12
LTBR-201ENST00000228918 AKIRIN1Q9H9L7 192 aaPredicted RBP14.28□□□□□ -0.12
LTBR-201ENST00000228918 F5H5K5 113 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 FAHP16930 419 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 SERPINA2P20848 420 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 GLRA1P23415 457 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 ZNF133P52736 654 aaPredicted RBP14.27□□□□□ -0.12
LTBR-201ENST00000228918 AKR1C2P52895 323 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 AKR1C1Q04828 323 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 SLC16A14Q7RTX9 510 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 TDHQ8IZJ6 230 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 POC1AQ8NBT0 407 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 TMEM54Q969K7 222 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 ARL11Q969Q4 196 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 NABP1Q96AH0 204 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 C2orf50Q96LR7 162 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 TSNAXQ99598 290 aaKnown RBP14.27□□□□□ -0.12
LTBR-201ENST00000228918 CHST5Q9GZS9 411 aa14.27□□□□□ -0.12
LTBR-201ENST00000228918 UBE2ZQ9H832 354 aaPredicted RBP14.27□□□□□ -0.12
LTBR-201ENST00000228918 OR5H15A6NDH6 313 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 SERPINE3A8MV23 424 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 GPR31O00270 319 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 FAM157CP0CG43 387 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 GUCA1AP43080 201 aaPredicted RBP14.27□□□□□ -0.13
LTBR-201ENST00000228918 MEOX2P50222 304 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 RAB13P51153 203 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 IL15RAQ13261 267 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 PCOLCEQ15113 449 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 Q6ZSR3 168 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 OR51F2Q8NH61 342 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 PP6455Q8WZ26 134 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 DUSP23Q9BVJ7 150 aa14.27□□□□□ -0.13
LTBR-201ENST00000228918 METTL8Q9H825 291 aaKnown RBP14.27□□□□□ -0.13
LTBR-201ENST00000228918 A0A087WZY1 265 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 OTX1P32242 354 aaPredicted RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 HIST1H3AP68431 136 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 RAB32Q13637 225 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 SURF2Q15527 256 aaPredicted RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 HIST2H3PS2Q5TEC6 136 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 ZNF585AQ6P3V2 769 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 DRAM2Q6UX65 266 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 HIST2H3AQ71DI3 136 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 RAB11FIP2Q7L804 512 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 PUSL1Q8N0Z8 303 aaKnown RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 SVBPQ8N300 66 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 EMG1Q92979 244 aaKnown RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 RTTNQ86VV8 2226 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 FIGNL2A6NMB9 653 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 NUDT19A8MXV4 375 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 CA11O75493 328 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 CSTBP04080 98 aaKnown RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 CELA2AP08217 269 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 CYC1P08574 325 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 FCGR2AP12318 317 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 CPT2P23786 658 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 PI4KAP42356 2102 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 RSPO1Q2MKA7 263 aaPredicted RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 PLEKHN1Q494U1 663 aaPredicted RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 HAS2Q92819 552 aa14.26□□□□□ -0.13
LTBR-201ENST00000228918 NECAB3Q96P71 396 aaPredicted RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 ZNF385AQ96PM9 386 aaKnown RBP14.26□□□□□ -0.13
LTBR-201ENST00000228918 K7ESF4 209 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 CD63P08962 238 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 PET100P0DJ07 73 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 PTGER4P35408 488 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 ZNF84P51523 738 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 POLR2GP62487 172 aaKnown RBP eCLIP14.25□□□□□ -0.13
LTBR-201ENST00000228918 ARL6IP1Q15041 203 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 GUCA2BQ16661 112 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 ZNF528Q3MIS6 628 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 CHRFAM7AQ494W8 412 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 C10orf91Q5T1B1 145 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 FAM219AQ8IW50 185 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 TMEM123Q8N131 208 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 OR4A4PQ8NGN8 299 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 PIGTQ969N2 578 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 SLC5A7Q9GZV3 580 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 MMP26Q9NRE1 261 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 DNAJB11Q9UBS4 358 aa14.25□□□□□ -0.13
LTBR-201ENST00000228918 PIGLQ9Y2B2 252 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms