RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 MCRIP1C9JLW8 97 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 MRPL33O75394 65 aaKnown RBP16.65■□□□□ 0.26
YBX3-201ENST00000228251 LCATP04180 440 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 CSN2P05814 226 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 MEOX1P50221 254 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 SOX8P57073 446 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 GK2Q14410 553 aaPredicted RBP16.65■□□□□ 0.26
YBX3-201ENST00000228251 GRK1Q15835 563 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 PLXDC2Q6UX71 529 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 STEAP2Q8NFT2 490 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 SPSB4Q96A44 273 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 PARD6AQ9NPB6 346 aa16.65■□□□□ 0.26
YBX3-201ENST00000228251 SNAPC5O75971 98 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 SLC22A5O76082 557 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 HLA-GP17693 338 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 FAM3AP98173 230 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 SRYQ05066 204 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 OR8B8Q15620 311 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 ACTBL2Q562R1 376 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 FAHD2BQ6P2I3 314 aaPredicted RBP16.64■□□□□ 0.25
YBX3-201ENST00000228251 CPEB3Q8NE35 698 aaKnown RBP16.64■□□□□ 0.25
YBX3-201ENST00000228251 OR51T1Q8NGJ9 327 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 OR10K1Q8NGX5 313 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 OR4K15Q8NH41 348 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 FAHD2AQ96GK7 314 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 Q96M66 194 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 C1QTNF5Q9BXJ0 243 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 PECRQ9BY49 303 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 ACKR4Q9NPB9 350 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 EDN3P14138 238 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 CBX5P45973 191 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 PABPC1L2AQ5JQF8 200 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 C6orf183Q5T699 404 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 ATP1A1-AS1Q5TC04 95 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 LYG2Q86SG7 212 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 TUSC5Q8IXB3 177 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 ARRDC1Q8N5I2 433 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 IL22RA1Q8N6P7 574 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 FNDC9Q8TBE3 224 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 ELMOD3Q96FG2 381 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 DPCDQ9BVM2 203 aaPredicted RBP16.64■□□□□ 0.25
YBX3-201ENST00000228251 PRDM14Q9GZV8 571 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 PARPBPQ9NWS1 579 aa16.64■□□□□ 0.25
YBX3-201ENST00000228251 CDRT15L2A8MXV6 281 aa16.63■□□□□ 0.25
YBX3-201ENST00000228251 CD8AP01732 235 aa16.63■□□□□ 0.25
YBX3-201ENST00000228251 IGHV3-9P01782 118 aa16.63■□□□□ 0.25
YBX3-201ENST00000228251 PMP2P02689 132 aa16.63■□□□□ 0.25
YBX3-201ENST00000228251 NFYAP23511 347 aaPredicted RBP16.63■□□□□ 0.25
YBX3-201ENST00000228251 ARF1P84077 181 aaKnown RBP16.63■□□□□ 0.25
YBX3-201ENST00000228251 ZNF92Q03936 586 aa16.63■□□□□ 0.25
YBX3-201ENST00000228251 OR5M8Q8NGP6 311 aa16.63■□□□□ 0.25
YBX3-201ENST00000228251 RPS10-NUDT3A0A1W2PQS6 291 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 EFSO43281 561 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 FARS2O95363 451 aaKnown RBP16.62■□□□□ 0.25
YBX3-201ENST00000228251 SYNGR4O95473 234 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 CFDP00746 253 aaPredicted RBP16.62■□□□□ 0.25
YBX3-201ENST00000228251 SERPINA2P20848 420 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 PRKACBP22694 351 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 CPT2P23786 658 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 CD82P27701 267 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 FOXG1P55316 489 aaPredicted RBP16.62■□□□□ 0.25
YBX3-201ENST00000228251 SEC61A1P61619 476 aaKnown RBP16.62■□□□□ 0.25
YBX3-201ENST00000228251 PPP1R1AQ13522 171 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 OPCMLQ14982 345 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 CLVS2Q5SYC1 327 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 LHFPL1Q86WI0 220 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 MITD1Q8WV92 249 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 MCTS1Q9ULC4 181 aaKnown RBP16.62■□□□□ 0.25
YBX3-201ENST00000228251 LIPGQ9Y5X9 500 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 AUP1Q9Y679 476 aa16.62■□□□□ 0.25
YBX3-201ENST00000228251 TNRC6AQ8NDV7 1962 aaKnown RBP16.62■□□□□ 0.25
YBX3-201ENST00000228251 TRAV14DV4A0A0A6YYC5 116 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 C9orf170A2RU37 121 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 FIGNL2A6NMB9 653 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 SERPINE3A8MV23 424 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 KLRC4-KLRK1H3BQV0 150 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 ACTL6AO96019 429 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 BLVRBP30043 206 aaPredicted RBP16.61■□□□□ 0.25
YBX3-201ENST00000228251 MTCP1P56278 107 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 PPIAP62937 165 aaKnown RBP16.61■□□□□ 0.25
YBX3-201ENST00000228251 PLGLB1Q02325 96 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 EXOSC2Q13868 293 aaKnown RBP16.61■□□□□ 0.25
YBX3-201ENST00000228251 CNN3Q15417 329 aaKnown RBP16.61■□□□□ 0.25
YBX3-201ENST00000228251 TERB2Q8NHR7 220 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 LOC100509620A0A075B734 347 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 LINC00862A6NCI5 91 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 ZNF587BE7ETH6 402 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 MSTNO14793 375 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 HLA-AP01891 365 aaKnown RBP16.61■□□□□ 0.25
YBX3-201ENST00000228251 PRSS12P56730 875 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 ARL6IP1Q15041 203 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 PPA1Q15181 289 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 TGIF1Q15583 401 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 SIGIRRQ6IA17 410 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 LPCAT3Q6P1A2 487 aa16.61■□□□□ 0.25
YBX3-201ENST00000228251 PEG10Q86TG7 708 aaKnown RBP16.61■□□□□ 0.25
YBX3-201ENST00000228251 ADAD2Q8NCV1 583 aaKnown RBP16.61■□□□□ 0.25
YBX3-201ENST00000228251 ZNF503-AS2A6NEH8 195 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 M0R233 179 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 XRCC2O43543 280 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms