RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 EGLN1Q9GZT9 426 aa12.19□□□□□ -0.46
TGFBR3-201ENST00000212355 TCRBV16S1A1N1A0A5B0 115 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 H0YIG0 161 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 ACOT6Q3I5F7 207 aaPredicted RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 SLC25A43Q8WUT9 341 aaPredicted RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 A0A1B0GUH1 482 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 CDC42EP2O14613 210 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 BCL2L11O43521 198 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 TBPP20226 339 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 BAP18Q8IXM2 172 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 EXTL1Q92935 676 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 CLDN23Q96B33 292 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 ABHD14AQ9BUJ0 271 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 LIN7CQ9NUP9 197 aaKnown RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 TIMM9Q9Y5J7 89 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 FZD6O60353 706 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 RAB1AP62820 205 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 CISD2Q8N5K1 135 aaKnown RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 GPX8Q8TED1 209 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 MOGAT1Q96PD6 335 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 PHF7Q9BWX1 381 aaPredicted RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 FGF20Q9NP95 211 aaPredicted RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 MBD1Q9UIS9 605 aaPredicted RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 ALS2Q96Q42 1657 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 COL16A1Q07092 1604 aaPredicted RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 PRSS44E7EML9 344 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 PRRG2O14669 202 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 CSN1S1P47710 185 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 PTTG1IPP53801 180 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 C11orf87Q6NUJ2 197 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 COMMD5Q9GZQ3 224 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 M0R1X1 148 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 FCGR3BO75015 233 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 OR1C1Q15619 314 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 SPINK14Q6IE38 97 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 CBLN3Q6UW01 205 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 OR11G2Q8NGC1 345 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 POM121Q96HA1 1249 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 POMT2Q9UKY4 750 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 CD96P40200 585 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 FZD5Q13467 585 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 VAMP3Q15836 100 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 DHRS7BQ6IAN0 325 aaPredicted RBP12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 ARHGEF39Q8N4T4 335 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 OTOSQ8NHW6 89 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 NEURL2Q9BR09 285 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF251Q9BRH9 671 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 ZDHHC11Q9H8X9 412 aa12.18□□□□□ -0.46
TGFBR3-201ENST00000212355 FAM24AA6NFZ4 105 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 RNASEK-C17orf49H0YIS7 233 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 SNRPCP09234 159 aaKnown RBP12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF425Q6IV72 752 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 DHRS13Q6UX07 377 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ZNF429Q86V71 674 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 CALHM3Q86XJ0 350 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 PHYHIPQ92561 330 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 GALMQ96C23 342 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 FZD2Q14332 565 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 FFAR4Q5NUL3 377 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ABI3BPQ7Z7G0 1075 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 FLRT3Q9NZU0 649 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 TRAV39A0A0B4J263 110 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ZFPL1O95159 310 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 DAOP14920 347 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 MMP15P51511 669 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ERVS71-1P61550 626 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 C1QL3Q5VWW1 255 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ANKRD33Q7Z3H0 272 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 OR4D11Q8NGI4 311 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 OR8D4Q8NGM9 314 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 HMGCLL1Q8TB92 370 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 SCPEP1Q9HB40 452 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ICAM5Q9UMF0 924 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 POLDIP2Q9Y2S7 368 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 CRYAAP02489 173 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 GALNSP34059 522 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ETV6P41212 452 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 SUMO1P63165 101 aaKnown RBP12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 TFF2Q03403 129 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 C12orf73Q69YU5 71 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 CCDC190Q86UF4 302 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ANGPTL6Q8NI99 470 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 CNTD2Q9H8S5 307 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 SLC25A22Q9H936 323 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 ERRFI1Q9UJM3 462 aaPredicted RBP12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 PSG11Q9UQ72 335 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 NINQ8N4C6 2090 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 FAM90A27PA6NNH2 459 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 DHHO43323 396 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 CT45A10P0DMU9 189 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 PNLIPP16233 465 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 WDR88Q6ZMY6 472 aa12.17□□□□□ -0.46
TGFBR3-201ENST00000212355 LSRQ86X29 649 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms