RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 WDR73Q6P4I2 378 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 UBE3DQ7Z6J8 389 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 ARL6IP6Q8N6S5 226 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 GGACTQ9BVM4 153 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 SLC17A5Q9NRA2 495 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 CLEC18AA5D8T8 446 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 ALOX12BO75342 701 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 OR3A1P47881 315 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 FGF8P55075 233 aaPredicted RBP9.4□□□□□ -0.9
VCL-201ENST00000211998 ZNF77Q15935 545 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 CLEC18CQ8NCF0 446 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 EXOGQ9Y2C4 368 aaKnown RBP9.4□□□□□ -0.9
VCL-201ENST00000211998 R4GMQ9 66 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 COL16A1Q07092 1604 aaPredicted RBP9.4□□□□□ -0.9
VCL-201ENST00000211998 HS3ST1O14792 307 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 ARPC3O15145 178 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 EFSO43281 561 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 BCL6P41182 706 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 SUCLG1P53597 346 aaKnown RBP9.4□□□□□ -0.9
VCL-201ENST00000211998 PNLIPRP3Q17RR3 467 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 EMC4Q5J8M3 183 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 PRAMEF20Q5VT98 475 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 C9orf135Q5VTT2 229 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 ZNF880Q6PDB4 577 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 WNT2BQ93097 391 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 MRPS24Q96EL2 167 aaKnown RBP9.4□□□□□ -0.9
VCL-201ENST00000211998 SHARPINQ9H0F6 387 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 B3GAT1Q9P2W7 334 aa9.4□□□□□ -0.9
VCL-201ENST00000211998 MRPS2Q9Y399 296 aaKnown RBP9.4□□□□□ -0.9
VCL-201ENST00000211998 FAM24AA6NFZ4 105 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 PRAMEF25A6NGN4 478 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 IGHA2P01877 340 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 CRHP06850 196 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 GNG10P50151 68 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 DUSP8Q13202 625 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 TRMT12Q53H54 448 aaKnown RBP9.4□□□□□ -0.91
VCL-201ENST00000211998 PRAMEF5Q5TYX0 476 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 PRAMEF6Q5VXH4 476 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 DRAM2Q6UX65 266 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 OR13H1Q8NG92 308 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 TRIB1Q96RU8 372 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 IL21Q9HBE4 155 aa9.4□□□□□ -0.91
VCL-201ENST00000211998 M0R2Z0 102 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 ADAP1O75689 374 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 TMEM267Q0VDI3 215 aaPredicted RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 SURF2Q15527 256 aaPredicted RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 C1orf140Q5VVS0 124 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 METRNLQ641Q3 311 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 LINC01465Q8N7H1 131 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 FIGNL2A6NMB9 653 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 WDR1O75083 606 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 MUC1P15941 1255 aaPredicted RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 IRS1P35568 1242 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 ANKRD33Q7Z3H0 272 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 C17orf47Q8NEP4 570 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 TMPRSS13Q9BYE2 586 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 VN1R1Q9GZP7 353 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 PARP11Q9NR21 331 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 PRSS50Q9UI38 385 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 DDX60Q8IY21 1712 aaKnown RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 ADAMTSL3P82987 1691 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 MPTX1A8MV57 137 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 MASP2O00187 686 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 RRP8O43159 456 aaKnown RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 EN2P19622 333 aaPredicted RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 KLF9Q13886 244 aaPredicted RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 RPEL1Q2QD12 228 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 HLA-DRB5Q30154 266 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 OR2A1Q8NGT9 310 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 GOT1L1Q8NHS2 421 aaPredicted RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 PIK3IP1Q96FE7 263 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 NMES1Q9C002 83 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 LPAR5Q9H1C0 372 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 GPR84Q9NQS5 396 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 ETHE1O95571 254 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 NKAIN2Q5VXU1 208 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 DHRS13Q6UX07 377 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 GJC3Q8NFK1 279 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 OR51F2Q8NH61 342 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 PELI1Q96FA3 418 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 DHCR7Q9UBM7 475 aaKnown RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
VCL-201ENST00000211998 ARID1BQ8NFD5 2236 aaPredicted RBP9.39□□□□□ -0.91
VCL-201ENST00000211998 ZNF253O75346 499 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 NRASP01111 189 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 HRASP01112 189 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 KRASP01116 189 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 GCGP01275 180 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 CT45A10P0DMU9 189 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 DPTQ07507 201 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ZNF124Q15973 351 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ZADH2Q8N4Q0 377 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ERGIC1Q969X5 290 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 ASB16Q96NS5 453 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 MMP17Q9ULZ9 603 aa9.38□□□□□ -0.91
VCL-201ENST00000211998 PKD1L3Q7Z443 1732 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms