RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 AFF3P51826 1226 aaKnown RBP13.27□□□□□ -0.28
EFNB1-201ENST00000204961 NAXDQ8IW45 347 aa13.27□□□□□ -0.28
EFNB1-201ENST00000204961 OR13G1Q8NGZ3 307 aa13.27□□□□□ -0.28
EFNB1-201ENST00000204961 MFSD8Q8NHS3 518 aa13.27□□□□□ -0.28
EFNB1-201ENST00000204961 UQCC2Q9BRT2 126 aa13.27□□□□□ -0.28
EFNB1-201ENST00000204961 OR10A2Q9H208 303 aa13.27□□□□□ -0.28
EFNB1-201ENST00000204961 CSTBP04080 98 aaKnown RBP13.27□□□□□ -0.29
EFNB1-201ENST00000204961 APOBEC1P41238 236 aaKnown RBP13.27□□□□□ -0.29
EFNB1-201ENST00000204961 CTAG1AP78358 180 aa13.27□□□□□ -0.29
EFNB1-201ENST00000204961 DCDP81605 110 aaKnown RBP13.27□□□□□ -0.29
EFNB1-201ENST00000204961 DHODHQ02127 395 aa13.27□□□□□ -0.29
EFNB1-201ENST00000204961 UBE2V2Q15819 145 aa13.27□□□□□ -0.29
EFNB1-201ENST00000204961 HSD17B11Q8NBQ5 300 aa13.27□□□□□ -0.29
EFNB1-201ENST00000204961 ZNF285Q96NJ3 590 aa13.27□□□□□ -0.29
EFNB1-201ENST00000204961 MED13Q9UHV7 2174 aa13.27□□□□□ -0.29
EFNB1-201ENST00000204961 GP1BAP07359 652 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 HIST1H1DP16402 221 aaKnown RBP13.26□□□□□ -0.29
EFNB1-201ENST00000204961 CSNK1A1P48729 337 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 SNAI3Q3KNW1 292 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 ZNF468Q5VIY5 522 aaPredicted RBP13.26□□□□□ -0.29
EFNB1-201ENST00000204961 OGFOD3Q6PK18 319 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 ISOC2Q96AB3 205 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 OR6C65A6NJZ3 312 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 DHRS7CA6NNS2 312 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 SGCEO43556 437 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 OTX2P32243 289 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 MMP16P51512 607 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 PCK2Q16822 640 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 PLPPR5Q32ZL2 321 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 MITD1Q8WV92 249 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 BSCL2Q96G97 398 aaPredicted RBP13.26□□□□□ -0.29
EFNB1-201ENST00000204961 CCDC74BQ96LY2 380 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 WIF1Q9Y5W5 379 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 ZFAND5O76080 213 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 RAB13P51153 203 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 TMEM230Q96A57 120 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 RNF126Q9BV68 326 aa13.26□□□□□ -0.29
EFNB1-201ENST00000204961 HFEQ30201 348 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 NOXO1Q8NFA2 376 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 GTF3C1Q12789 2109 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 A0A096LPE4 126 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 A0A1W2PPZ6 126 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 TRAF3IP2O43734 574 aaPredicted RBP13.25□□□□□ -0.29
EFNB1-201ENST00000204961 SRSF10O75494 262 aaKnown RBP13.25□□□□□ -0.29
EFNB1-201ENST00000204961 PRH1P02810 166 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 SRFP11831 508 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 ZNF17P17021 662 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 ADCYAP1P18509 176 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 PABPC1L2AQ5JQF8 200 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 ZNF774Q6NX45 483 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 PPP1R3BQ86XI6 285 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 OR11L1Q8NGX0 322 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 NEK7Q8TDX7 302 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 PIGCQ92535 297 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 UTP23Q9BRU9 249 aaKnown RBP13.25□□□□□ -0.29
EFNB1-201ENST00000204961 SLC25A32Q9H2D1 315 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 MCTS1Q9ULC4 181 aaKnown RBP13.25□□□□□ -0.29
EFNB1-201ENST00000204961 B3GALT5Q9Y2C3 310 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 TMEM131Q92545 1883 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 LRP4O75096 1905 aa13.25□□□□□ -0.29
EFNB1-201ENST00000204961 BLACEA4D250 179 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 LINC00587B1AMM8 73 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 ATXN7O15265 892 aaPredicted RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 PIGYQ3MUY2 71 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 C1orf100Q5SVJ3 147 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 RBMS3Q6XE24 437 aaKnown RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 MISPQ8IVT2 679 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 NKAIN3Q8N8D7 197 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 WDSUB1Q8N9V3 476 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 KCNG3Q8TAE7 436 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 URM1Q9BTM9 101 aaKnown RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 MAGT1Q9H0U3 335 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 ALKBH4Q9NXW9 302 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 DKKL1Q9UK85 242 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 TRBV23-1A0A0A0MS06 115 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 LDLRAD4O15165 306 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 CRYBA1P05813 215 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 HPNP05981 417 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 PGA4P0DJD7 388 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 PGA3P0DJD8 388 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 SNRPEP62304 92 aaKnown RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 SPIN3Q5JUX0 258 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 ALKBH2Q6NS38 261 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 FDX2Q6P4F2 183 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 RAB11FIP2Q7L804 512 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 SPAG16Q8N0X2 631 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 MRPL24Q96A35 216 aaKnown RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 ULBP2Q9BZM5 246 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 AMDHD2Q9Y303 409 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 FLVCR1Q9Y5Y0 555 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 PRSS44E7EML9 344 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 OR2F2O95006 317 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 PDGFBP01127 241 aaPredicted RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 SNRNP70P08621 437 aaKnown RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 TPT1P13693 172 aaKnown RBP13.24□□□□□ -0.29
EFNB1-201ENST00000204961 EDN3P14138 238 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 PTGFRP43088 359 aa13.24□□□□□ -0.29
EFNB1-201ENST00000204961 PDZK1IP1Q13113 114 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms