RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Tdp2Q9JJX7 370 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 EdarQ9R187 448 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Vmn1r61W4VSP5 300 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Rpl12P35979 165 aaKnown RBP16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ext1P97464 746 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr987Q7TRA2 309 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Sp8Q8BMJ8 486 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Plpp7Q91WB2 271 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ms4a6dQ99N07 247 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr566A0A1B0GST0 319 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm4907B1AXB9 411 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm17430F6RSK3 157 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 SnrpgP62309 76 aaKnown RBP16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Obp1aQ9D3H2 163 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Alkbh7Q9D6Z0 221 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Pkd1l3Q2EG98 2201 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 1810065E05RikQ5NC41 235 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Sqstm1Q64337 442 aaKnown RBP16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 P2ry12Q9CPV9 347 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ceacam18Q9D871 376 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Sdk1Q3UH53 2193 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm42791D3YYB5 209 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Slc36a3Q811P0 477 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Tmbim1Q8BJZ3 309 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Mettl2Q8BMK1 389 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Lancl3Q8CD19 420 aa16.95■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ptger1P35375 405 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Fabp6P51162 128 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Fbxw17Q8CFE8 466 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Nup98Q6PFD9 1816 aaKnown RBP16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Zfp345A2AQA1 561 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 1700003H04RikE9PXM2 192 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 LipnQ3U4B4 400 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Mrpl20Q9CQL4 149 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Plekha2Q9ERS5 425 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ankrd16A2AS55 361 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Defa9P50707 93 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Lrrn4clQ3TYX2 239 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 1700001K19RikQ80ZT1 219 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr303Q8VFP0 319 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Man2c1Q91W89 1039 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Trappc4Q9ES56 219 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 4930451G09RikQ8C5G4 195 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr1330Q8VEY6 315 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr1417Q8VGJ6 315 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 GzmmO08643 264 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Wnt11P48615 354 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm853Q3UNZ2 425 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Spin2cQ6NVE3 257 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Nanos1Q80WY3 267 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Prrg4Q8BGN6 226 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Actrt3Q8BXF8 369 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Tas1r1Q99PG6 842 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Hrasls5Q9CPX5 270 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Vmn1r52Q9EP79 309 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Rnf32Q9JIT1 368 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gstz1Q9WVL0 216 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr1160A2AVT0 319 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 CebpbP28033 296 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gpr83P30731 423 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Fam109bQ14B98 259 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Stpg4Q9DAG5 247 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Zfp964B2RR88 472 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm4177D3YTX5 305 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Vmn1r103K7N6X7 305 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Vmn1r151L7N288 305 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Tfb2mQ3TL26 396 aaKnown RBP16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 H2-M10.6Q85ZW5 330 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ctdsp2Q8BX07 270 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Frs2Q8C180 508 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr649Q8VGW1 312 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Rnf151Q9CQ29 239 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm9817Q9D2M0 144 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr943Q9EQ92 314 aa16.94■□□□□ 0.3
Trim71-201ENSMUST00000111816 Vmn2r16E9Q025 850 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Fam117bQ3U3E2 584 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ceacam12Q3UKP4 300 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr132Q7TRI8 313 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr1312Q8VF10 317 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Sp6Q9ESX2 376 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm21818J3KMS6 170 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Cd46O88174 365 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 F2rl3O88634 396 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Galnt2Q6PB93 570 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 B630019K06RikQ7TNS5 333 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 ArsjQ8BM89 598 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Tmem126bQ9D1R1 230 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Dusp6Q9DBB1 381 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr993Q8VF75 314 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr1270Q8VGP3 304 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Flvcr2Q91X85 551 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Ccr5P51682 354 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Cks2P56390 79 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Olfr503Q7TRU8 323 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Cdca4Q9CWM2 237 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Fundc1Q9DB70 155 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Greb1lB9EJV3 1913 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm43720E0CXM8 267 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gm20877J3QPZ4 227 aa16.93■□□□□ 0.3
Trim71-201ENSMUST00000111816 Gpr33O88416 339 aa16.93■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms