RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 C1galt1c1Q9JMG2 316 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Usp36B1AQJ2 1098 aaKnown RBP8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r5B2RQT2 315 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 BC048679D3YXE9 172 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Zfp955bL7N232 545 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Prrt1O35449 306 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Klf9O35739 244 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 P06321 130 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Fabp2P55050 132 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Tubal3Q3UX10 446 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Pafah1b3Q61205 232 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Dll1Q61483 722 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Phox2aQ62066 280 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Znf629Q6A085 867 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr1222Q7TR02 311 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr1061Q7TR72 313 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr527Q7TRT9 305 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Mrps26Q80ZS3 200 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Cpt1cQ8BGD5 798 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Mospd3Q8BGG6 235 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Znf2Q8BIQ3 427 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Ppp1r3bQ8C767 284 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr862Q8VFJ1 306 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr1238Q8VG59 315 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr584Q8VGW0 319 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 4933400A11RikQ9CR52 288 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Gm10762Q9CZN6 115 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 4930447A16RikQ9D5F6 132 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Shisa5Q9D7I0 235 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Znf593Q9DB42 134 aaKnown RBP8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Suv39h2Q9EQQ0 477 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 RhagQ9QUT0 438 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 PthQ9Z0L6 115 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Gm4177D3YTX5 305 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr430E9Q5F1 317 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Gm2663F6R7E8 247 aaKnown RBP8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r127K7N6J5 305 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r142K7N6U0 305 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r115K7N6Y3 295 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r159K7N701 305 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Grcc10O35127 126 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 B3galt1O54904 326 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Csf1P07141 552 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Hspb1P14602 209 aaKnown RBP8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 CtdsplP58465 276 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 HnrnpkP61979 463 aaKnown RBP8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Rnf133Q14B02 382 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr140Q60878 302 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 AstlQ6HA09 435 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Exosc3Q7TQK4 274 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr259Q7TS20 312 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Gpr137Q80ZU9 396 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Tmem63aQ91YT8 804 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 1810009J06RikQ9CPN7 247 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Atp5sQ9CRA7 200 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Pcbd2Q9CZL5 136 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 BambiQ9D0L6 260 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Zfp869Q9DC47 529 aa8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Anapc1P53995 1944 aaKnown RBP8.74□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Gm4131A0A140LJ24 318 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Zfp69A2A761 587 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Psmb1O09061 240 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 P01808 119 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Hist1h1cP15864 212 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr18Q0VAX9 331 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 MffQ6PCP5 291 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Lrfn5Q8BXA0 719 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r217Q8R270 298 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Vmn1r17Q8R2D8 303 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Gfod2Q9CYH5 385 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Arl5bQ9D4P0 179 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 ApmapQ9D7N9 415 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Nkx6-2D3Z4R4 277 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Zfp961E9Q4R5 444 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Cyp1a2P00186 513 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Itga5P11688 1053 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 P18524 117 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Clk1P22518 483 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 CapzbP47757 277 aaKnown RBP8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Isg20l2Q3U1G5 368 aaKnown RBP8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Psg26Q4KL65 475 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Taar8cQ5QD05 344 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Il11ra1Q64385 432 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr1385Q7TQT1 309 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr1282Q7TQY5 305 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Pi15Q8BS03 258 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Neil1Q8K4Q6 389 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr919Q8VF78 315 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr837Q8VFJ4 312 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr1497Q8VG11 314 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 QprtQ91X91 299 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Mrpl24Q9CQ06 216 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 9230104L09RikQ9D264 133 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Srxn1Q9D975 136 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Cav2Q9WVC3 162 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Cldn13Q9Z0S4 211 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Piezo2Q8CD54 2822 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Trbv23A0A0A6YWQ1 115 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Olfr571E9Q407 322 aa8.73□□□□□ -1.01
Pcdh1-201ENSMUST00000057185 Gm6576F6YTZ4 274 aa8.73□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 53.3 ms