RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	PAX2	Q02962	417 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	KRT74	Q7RTS7	529 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZDHHC23	Q8IYP9	409 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	PQLC1	Q8N2U9	271 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	SEMA6D	Q8NFY4	1073 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR2T27	Q8NH04	317 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	SPATA3	Q8NHX4	192 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	LRRC29	Q8WV35	223 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	UBE2F	Q969M7	185 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	PPP1R14A	Q96A00	147 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	HIST1H2AA	Q96QV6	131 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	TLNRD1	Q9H1K6	362 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	GTF2A1L	Q9UNN4	478 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	AUP1	Q9Y679	476 aa		12.54	□□□□□ -0.4
PHGDH-231	ENST00000641939	CDIPT	O14735	213 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	ADAM20	O43506	726 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	APOL3	O95236	402 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	FSHB	P01225	129 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	KRT8	P05787	483 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	EGR1	P18146	543 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	CFHR2	P36980	270 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	NPY4R	P50391	375 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	PAX8	Q06710	450 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	RIPPLY1	Q0D2K3	151 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	KRTAP24-1	Q3LI83	254 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	SLC25A30	Q5SVS4	291 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	BCL2L15	Q5TBC7	163 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZBTB37	Q5TC79	503 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	WDR25	Q64LD2	544 aa	Predicted RBP	12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	BTNL3	Q6UXE8	466 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	WDR82	Q6UXN9	313 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZNF841	Q6ZN19	808 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	PLEKHG7	Q6ZR37	379 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	SSX6	Q7RTT6	188 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	THAP5	Q7Z6K1	395 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	FAM90A1	Q86YD7	464 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	PHC2	Q8IXK0	858 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	ELMOD2	Q8IZ81	293 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	YIPF7	Q8N8F6	280 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR10H4	Q8NGA5	316 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	HPSE2	Q8WWQ2	592 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	RAB40A	Q8WXH6	277 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	RNF170	Q96K19	258 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	MRI1	Q9BV20	369 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	OR52A1	Q9UKL2	312 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939	SNX5	Q9Y5X3	404 aa		12.53	□□□□□ -0.4
PHGDH-231	ENST00000641939		A0A0A6YYJ9	748 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	IGHV2-70D	A0A0C4DH43	119 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	METTL15	A6NJ78	407 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	SRRM5	B3KS81	715 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	TNFRSF13B	O14836	293 aa	Predicted RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	ENTPD6	O75354	484 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	MTRF1	O75570	445 aa	Known RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	DHRS3	O75911	302 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	RPP14	O95059	124 aa	Known RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	GYPA	P02724	150 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	TTR	P02766	147 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	MTNR1A	P48039	350 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	SNRPG	P62308	76 aa	Known RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	MICB	Q29980	383 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	CEACAM21	Q3KPI0	293 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	FAM76B	Q5HYJ3	339 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	MEDAG	Q5VYS4	303 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	TEX36	Q5VZQ5	186 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	KCTD8	Q6ZWB6	473 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF418	Q8TF45	676 aa	Predicted RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	RPL3L	Q92901	407 aa	Known RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	DACT3	Q96B18	629 aa	Predicted RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	MBOAT4	Q96T53	435 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	SLC29A1	Q99808	456 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	FGF23	Q9GZV9	251 aa	Predicted RBP	12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	ERVK-18	Q9QC07	812 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	CTSZ	Q9UBR2	303 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	PIGL	Q9Y2B2	252 aa		12.52	□□□□□ -0.41
PHGDH-231	ENST00000641939	IGHV3OR15-7	A0A075B7D8	119 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	KIR2DS1	A0A191URI9	304 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	SULT1C4	O75897	302 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	MUC1	P15941	1255 aa	Predicted RBP	12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	FAH	P16930	419 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	GPM6A	P51674	278 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	GNG3	P63215	75 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	OCLN	Q16625	522 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	ARMCX4	Q5H9R4	360 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF684	Q5T5D7	378 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZBTB49	Q6ZSB9	765 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	SCCPDH	Q8NBX0	429 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	OR10Z1	Q8NGY1	313 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	STMN2	Q93045	179 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	TECTB	Q96PL2	329 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	ENPP5	Q9UJA9	477 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939	GMPPB	Q9Y5P6	360 aa		12.51	□□□□□ -0.41
PHGDH-231	ENST00000641939		A0A1B0GTI1	187 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	SNTN	A6NMZ2	147 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	ZNF732	B4DXR9	585 aa		12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.5	□□□□□ -0.41
PHGDH-231	ENST00000641939	P2RY10	O00398	339 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms