RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 MGMTP16455 207 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 ZBTB25P24278 435 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 FOXB1Q99853 325 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 URM1Q9BTM9 101 aaKnown RBP14.81□□□□□ -0.04
PHGDH-229ENST00000641891 ELL3Q9HB65 397 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-229ENST00000641891 BOKQ9UMX3 212 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-229ENST00000641891 MRPS18CQ9Y3D5 142 aaKnown RBP14.81□□□□□ -0.04
PHGDH-229ENST00000641891 LINC00862A6NCI5 91 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 FAM166BA8MTA8 275 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 CYTIPO60759 359 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 IFNA6P05013 189 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 NAT2P11245 290 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 HTR5AP47898 357 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 PSG4Q00888 419 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 ABHD17BQ5VST6 288 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 DRAM2Q6UX65 266 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 LINC00696Q6ZRV3 163 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 TMUB2Q71RG4 321 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 REEP6Q96HR9 211 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 ZNF703Q9H7S9 590 aaPredicted RBP14.81□□□□□ -0.04
PHGDH-229ENST00000641891 GPR35Q9HC97 309 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 IL17BQ9UHF5 180 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 ANAPC10Q9UM13 185 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 CELSR3Q9NYQ7 3312 aa14.81□□□□□ -0.04
PHGDH-229ENST00000641891 MTRF1O75570 445 aaKnown RBP14.8□□□□□ -0.04
PHGDH-229ENST00000641891 APOC1P02654 83 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 ITGA3P26006 1051 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-229ENST00000641891 ARFRP1Q13795 201 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 HLXQ14774 488 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-229ENST00000641891 LYG2Q86SG7 212 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 FAM89BQ8N5H3 189 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 ZDHHC22Q8N966 263 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 SEMA6DQ8NFY4 1073 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 OR52H1Q8NGJ2 320 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 MARCH1Q8TCQ1 289 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 MAFIPQ8WZ33 124 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 ST8SIA4Q92187 359 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 HAS2Q92819 552 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 FBXW5Q969U6 566 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 CPNE4Q96A23 557 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-229ENST00000641891 FAM173AQ9BQD7 235 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 WNT5BQ9H1J7 359 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 NCOR1O75376 2440 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 OR6C6A6NF89 314 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 FOXI3A8MTJ6 420 aaPredicted RBP14.8□□□□□ -0.04
PHGDH-229ENST00000641891 HMSDA8MTL9 139 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 LCATP04180 440 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 HPNP05981 417 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 AKR1C4P17516 323 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 ZMYND11Q15326 602 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 TMEM164Q5U3C3 297 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 THOC7Q6I9Y2 204 aaKnown RBP14.8□□□□□ -0.04
PHGDH-229ENST00000641891 C3P1Q6ZMU1 363 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 SULF2Q8IWU5 870 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 SKA3Q8IX90 412 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 OR5M8Q8NGP6 311 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 LOXL4Q96JB6 756 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 GPR87Q9BY21 358 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 KCNN3Q9UGI6 736 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 MAB21L2Q9Y586 359 aa14.8□□□□□ -0.04
PHGDH-229ENST00000641891 C9orf170A2RU37 121 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 OR6C65A6NJZ3 312 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 NAT1P18440 290 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 BLVRBP30043 206 aaPredicted RBP14.79□□□□□ -0.04
PHGDH-229ENST00000641891 S100A11P31949 105 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 ALDH3B1P43353 468 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 SCRN3Q0VDG4 424 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 EIF3IQ13347 325 aaKnown RBP14.79□□□□□ -0.04
PHGDH-229ENST00000641891 IKZF1Q13422 519 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 OR1C1Q15619 314 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 DCAF10Q5QP82 559 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 MYO7BQ6PIF6 2116 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 SLC16A14Q7RTX9 510 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 ADAMTS17Q8TE56 1095 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 CASTOR1Q8WTX7 329 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 ST6GALNAC5Q9BVH7 336 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 OR2H1Q9GZK4 316 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 ARL6Q9H0F7 186 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 SLC6A15Q9H2J7 730 aa14.79□□□□□ -0.04
PHGDH-229ENST00000641891 RYDENQ9NUL5 291 aaKnown RBP14.79□□□□□ -0.04
PHGDH-229ENST00000641891 C21orf140B9A014 251 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 ZNHIT1O43257 154 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 PLATP00750 562 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 TBPP20226 339 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 VAMP1P23763 118 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 MAGEA5P43359 124 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 LHX2P50458 406 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 PNLIPRP3Q17RR3 467 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 ESCO2Q56NI9 601 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 CLLU1Q5K131 121 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 TSPO2Q5TGU0 170 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 SEC22AQ96IW7 307 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 PECRQ9BY49 303 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 IGKV1-27A0A075B6S5 117 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 FAM230AA0A1W2PPH8 454 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 ANGPTL7O43827 346 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 IL2RAP01589 272 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 C4BPBP20851 252 aa14.78□□□□□ -0.04
PHGDH-229ENST00000641891 AVPR2P30518 371 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms