RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 N6AMT1Q9Y5N5 214 aa8.45□□□□□ -1.06
PHGDH-222ENST00000641587 SOX21Q9Y651 276 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-222ENST00000641587 ZSCAN5BA6NJL1 495 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 F5H5K5 113 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 LOC110117498-PIK3R3F6TDL0 507 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 ABHD16AO95870 558 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 IGHV1-46P01743 117 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 TFAP2AP05549 437 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 ANXA2P07355 339 aaKnown RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 MMP7P09237 267 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 JUNBP17275 347 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 CCNOP22674 350 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 PRTN3P24158 256 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 FPR2P25090 351 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 APLNRP35414 380 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 CX3CR1P49238 355 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 GDI2P50395 445 aaKnown RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 GTF2A1P52655 376 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 GP2P55259 537 aaKnown RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 UCP2P55851 309 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 SELENOVP59797 346 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 SEC61A1P61619 476 aaKnown RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 HIST1H3AP68431 136 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 ECH1Q13011 328 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 MLLT11Q13015 90 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 MRPL28Q13084 256 aaKnown RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 HFEQ30201 348 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF684Q5T5D7 378 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 HIST2H3PS2Q5TEC6 136 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 DEGS2Q6QHC5 323 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 ARL9Q6T311 187 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 HIST2H3AQ71DI3 136 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 DOK3Q7L591 496 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF101Q8IZC7 436 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 OR1J1Q8NGS3 322 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 HAVCR2Q8TDQ0 301 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 SLC7A6Q92536 515 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 UFD1Q92890 307 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 RAB1CQ92928 201 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 COG8Q96MW5 612 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 COQ7Q99807 217 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 NIPAL2Q9H841 368 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 PNRC2Q9NPJ4 139 aaKnown RBP8.44□□□□□ -1.06
PHGDH-222ENST00000641587 BABAM2Q9NXR7 383 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 GPR160Q9UJ42 338 aa8.44□□□□□ -1.06
PHGDH-222ENST00000641587 VWFP04275 2813 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 IGHV3OR16-10A0A075B7F0 116 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 TRBV2A0A0J9YWF9 115 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 TMEM269A0A1B0GVZ9 245 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 OR6C6A6NF89 314 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 E9PI62 339 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 TRAPPC2LH3BP13 241 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 M0R135 149 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 LALBAP00709 142 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 IGHV3-13P01766 116 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 APOC1P02654 83 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 DBHP09172 617 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 CELP19835 753 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 MDKP21741 143 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-222ENST00000641587 GATA3P23771 443 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 STOMP27105 288 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 WNT5AP41221 380 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 ALDH3B2P48448 385 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF81P51508 661 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 TPTEP56180 551 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 PSMA6P60900 246 aaKnown RBP8.43□□□□□ -1.06
PHGDH-222ENST00000641587 BDH1Q02338 343 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 SLC3A1Q07837 685 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 SRSF4Q08170 494 aaKnown RBP8.43□□□□□ -1.06
PHGDH-222ENST00000641587 MFGE8Q08431 387 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-222ENST00000641587 DOC2BQ14184 412 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 TBC1D28Q2M2D7 210 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 ODF4Q2M2E3 257 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 SYT6Q5T7P8 510 aaPredicted RBP8.43□□□□□ -1.06
PHGDH-222ENST00000641587 BCL2L15Q5TBC7 163 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 LIPKQ5VXJ0 399 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF485Q8NCK3 441 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 TMIGD2Q96BF3 282 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 ELMOD3Q96FG2 381 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF799Q96GE5 643 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 TIMD4Q96H15 378 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 OPALINQ96PE5 141 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 KCNJ15Q99712 375 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 R4GMQ9 66 aa8.43□□□□□ -1.06
PHGDH-222ENST00000641587 WNK1Q9H4A3 2382 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 MDFIC2A0A1B0GVS7 189 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 C5orf49A4QMS7 147 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 CCDC160A6NGH7 325 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 CCRL2O00421 344 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 TBX1O43435 398 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 NOL3O60936 208 aaKnown RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 COX5BP10606 129 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 SLC2A1P11166 492 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 OMGP23515 440 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 TGM4P49221 684 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 MMP15P51511 669 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 ZNF121P58317 390 aaPredicted RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 BAMBIQ13145 260 aa8.42□□□□□ -1.06
PHGDH-222ENST00000641587 ALKBH1Q13686 389 aaKnown RBP8.42□□□□□ -1.06
PHGDH-222ENST00000641587 CDK5R1Q15078 307 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms