RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 ABCB10Q9NRK6 738 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 C14orf119Q9NWQ9 140 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 RIMS3Q9UJD0 308 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF222Q9UK12 451 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 GTF2A1LQ9UNN4 478 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 TBL2Q9Y4P3 447 aaKnown RBP6.38□□□□□ -1.39
SCARB2-226ENST00000640916 MUC4Q99102 2169 aa6.38□□□□□ -1.39
SCARB2-226ENST00000640916 IGKV1D-17A0A075B6S4 117 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 CCL24O00175 119 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 BHLHE40O14503 412 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 AHCYL1O43865 530 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 SLC16A7O60669 478 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 KHDRBS3O75525 346 aaKnown RBP6.37□□□□□ -1.39
SCARB2-226ENST00000640916 GLCEO94923 617 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 HCKP08631 526 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 IDO1P14902 403 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 TNFRSF1BP20333 461 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 MYF6P23409 242 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 POU1F1P28069 291 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 GP2P55259 537 aaKnown RBP6.37□□□□□ -1.39
SCARB2-226ENST00000640916 GMFBP60983 142 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 MALLQ13021 153 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 SELPLGQ14242 412 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 PAGE3Q5JUK9 113 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF626Q68DY1 528 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 SLC18B1Q6NT16 456 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF782Q6ZMW2 699 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-226ENST00000640916 TSEN54Q7Z6J9 526 aaKnown RBP6.37□□□□□ -1.39
SCARB2-226ENST00000640916 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-226ENST00000640916 FUNDC1Q8IVP5 155 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 KLHL30-AS1Q8NEE0 82 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 SLC26A10Q8NG04 563 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 OR11H6Q8NGC7 330 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 GATAD1Q8WUU5 269 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 DDB2Q92466 427 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 FOXRED1Q96CU9 486 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-226ENST00000640916 BPIFA2Q96DR5 249 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 FGF23Q9GZV9 251 aaPredicted RBP6.37□□□□□ -1.39
SCARB2-226ENST00000640916 NUAK2Q9H093 628 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 SYT4Q9H2B2 425 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 PFDN2Q9UHV9 154 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 MED31Q9Y3C7 131 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 ABCA13Q86UQ4 5058 aa6.37□□□□□ -1.39
SCARB2-226ENST00000640916 PSMB11A5LHX3 300 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 GGT3PA6NGU5 568 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 C17orf98A8MV24 154 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 SEC14L6B5MCN3 397 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 PRR23D1E9PI22 279 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-226ENST00000640916 OR5F1O95221 314 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ARG1P05089 322 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 CD14P08571 375 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 PRR23D2P0DMB1 279 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-226ENST00000640916 IFI30P13284 250 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 CD24P25063 80 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 AZGP1P25311 298 aaKnown RBP6.36□□□□□ -1.39
SCARB2-226ENST00000640916 SLC6A1P30531 599 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 OTX1P32242 354 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-226ENST00000640916 GRK5P34947 590 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 GGT2P36268 569 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 SPIBQ01892 262 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF273Q14593 569 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 KRT72Q14CN4 511 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 RFX4Q33E94 735 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF770Q6IQ21 691 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-226ENST00000640916 PTCHD4Q6ZW05 846 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 LINC00346Q8IVM7 164 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 DPP10Q8N608 796 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ANKRD42Q8N9B4 389 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 FAM156AQ8NDB6 213 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 LINC00476Q8WZB0 136 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ANP32BQ92688 251 aaKnown RBP6.36□□□□□ -1.39
SCARB2-226ENST00000640916 TSSK2Q96PF2 358 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ATF6BQ99941 703 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ZFP57Q9NU63 452 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.36□□□□□ -1.39
SCARB2-226ENST00000640916 GRHPRQ9UBQ7 328 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 LRP12Q9Y561 859 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 HILPDAQ9Y5L2 63 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 LYVE1Q9Y5Y7 322 aa6.36□□□□□ -1.39
SCARB2-226ENST00000640916 OR2AT4A6NND4 320 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 M0R135 149 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 CDC42EP2O14613 210 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 AKR7A2O43488 359 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 PSG2P11465 335 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF823P16415 610 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 DCTDP32321 178 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 MDH1P40925 334 aaKnown RBP6.35□□□□□ -1.39
SCARB2-226ENST00000640916 NAA10P41227 235 aaPredicted RBP6.35□□□□□ -1.39
SCARB2-226ENST00000640916 CDKN2AP42771 156 aaKnown RBP6.35□□□□□ -1.39
SCARB2-226ENST00000640916 RAB25P57735 213 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 TAS2R41P59536 307 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 MZT1Q08AG7 82 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 NFYCQ13952 458 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 WHAMMP3Q1A5X7 153 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 DEFB136Q30KP8 78 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 KLHL12Q53G59 568 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 C16orf89Q6UX73 402 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 DLEU7Q6UYE1 221 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 C16orf82Q7Z2V1 217 aa6.35□□□□□ -1.39
SCARB2-226ENST00000640916 ZNF695Q8IW36 515 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms