RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.08□□□□□ -0.47
PAX6-280ENST00000640872 EMG1Q92979 244 aaKnown RBP12.08□□□□□ -0.47
PAX6-280ENST00000640872 C8orf33Q9H7E9 229 aaPredicted RBP12.08□□□□□ -0.47
PAX6-280ENST00000640872 KLHL13Q9P2N7 655 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 TINAGQ9UJW2 476 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 SLCO1B1Q9Y6L6 691 aa12.08□□□□□ -0.47
PAX6-280ENST00000640872 SDK1Q7Z5N4 2213 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 TDRD6O60522 2096 aaKnown RBP12.08□□□□□ -0.48
PAX6-280ENST00000640872 A6NLC8 198 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 K7EPK0 472 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 FCGR2CP31995 323 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 OR3A2P47893 321 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 CSNK1EP49674 416 aaKnown RBP12.08□□□□□ -0.48
PAX6-280ENST00000640872 ZNF84P51523 738 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 HSD11B2P80365 405 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 TGIF1Q15583 401 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 OPN5Q6U736 354 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 FAM71E2Q8N5Q1 922 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 MOB1AQ9H8S9 216 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 SOHLH2Q9NX45 425 aa12.08□□□□□ -0.48
PAX6-280ENST00000640872 IGHV5-51A0A0C4DH38 117 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 A0A1W2PPH5 198 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 TCRBV21S2A2A0A5A6 115 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 DEDDO75618 318 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 CRTAPO75718 401 aaPredicted RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 SEMA4FO95754 770 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 SNCAP37840 140 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 SNU13P55769 128 aaKnown RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 UCP2P55851 309 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 TAS2R46P59540 309 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 CSNK2A1P68400 391 aaPredicted RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 ARFRP1Q13795 201 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 SURF2Q15527 256 aaPredicted RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 IAH1Q2TAA2 248 aaPredicted RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 FAM89BQ8N5H3 189 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 ZNF441Q8N8Z8 693 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 CSNK2A3Q8NEV1 391 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 OR9K2Q8NGE7 335 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 MFSD8Q8NHS3 518 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 SSC4DQ8WTU2 575 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 IP6K3Q96PC2 410 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 TGM7Q96PF1 710 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 ST6GALNAC5Q9BVH7 336 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.07□□□□□ -0.48
PAX6-280ENST00000640872 SLC2A4RGQ9NR83 387 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 EHFQ9NZC4 300 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 GHRLQ9UBU3 117 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 CD207Q9UJ71 328 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 SNRNP70P08621 437 aaKnown RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 OR8U8P0C7N1 319 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 ZNF17P17021 662 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 GABRG2P18507 467 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 ANOS1P23352 680 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 GLP1RP43220 463 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 DHPSP49366 369 aaPredicted RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 GFERP55789 205 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 TMEM33P57088 247 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 PNLDC1Q8NA58 520 aaKnown RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 UBAC2Q8NBM4 344 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 ISOC2Q96AB3 205 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 URM1Q9BTM9 101 aaKnown RBP12.07□□□□□ -0.48
PAX6-280ENST00000640872 LRRC61Q9BV99 259 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 ARV1Q9H2C2 271 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 CHST11Q9NPF2 352 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 GPR27Q9NS67 375 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 C1orf123Q9NWV4 160 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 MIOXQ9UGB7 285 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 TUBD1Q9UJT1 453 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 LHFPL6Q9Y693 200 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 THADAQ6YHU6 1953 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 WDFY3Q8IZQ1 3526 aa12.07□□□□□ -0.48
PAX6-280ENST00000640872 IFNA2P01563 188 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 THEGLP0DJG4 465 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 ZNF14P17017 642 aaPredicted RBP12.06□□□□□ -0.48
PAX6-280ENST00000640872 RAB5AP20339 215 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 TLE3Q04726 772 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 FAM189A2Q15884 450 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 Q6ZS52 159 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 TTLL10Q6ZVT0 673 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
PAX6-280ENST00000640872 COMMD1Q8N668 190 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 OR8B12Q8NGG6 310 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 MAFIPQ8WZ33 124 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 PRRX2Q99811 253 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 EMC6Q9BV81 110 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 OR10A2Q9H208 303 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 CUTCQ9NTM9 273 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 ZNF319Q9P2F9 582 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 ATXN7L1Q9ULK2 861 aaPredicted RBP12.06□□□□□ -0.48
PAX6-280ENST00000640872 C2CD4DB7Z1M9 353 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 TSPAN15O95858 294 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 KNG1P01042 644 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 HCKP08631 526 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 S100PP25815 95 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 LAP3P28838 519 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 RBMXP38159 391 aaKnown RBP12.06□□□□□ -0.48
PAX6-280ENST00000640872 BIDP55957 195 aa12.06□□□□□ -0.48
PAX6-280ENST00000640872 MIDNQ504T8 468 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms