RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MOGAT3Q86VF5 341 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 ZDHHC23Q8IYP9 409 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 OR13C5Q8NGS8 318 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 SMIM19Q96E16 107 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 ADAT3Q96EY9 351 aaPredicted RBP11.16□□□□□ -0.62
GTF3A-209ENST00000640289 YTHDF1Q9BYJ9 559 aaKnown RBP11.16□□□□□ -0.62
GTF3A-209ENST00000640289 GCM1Q9NP62 436 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 MYOZ1Q9NP98 299 aaPredicted RBP11.16□□□□□ -0.62
GTF3A-209ENST00000640289 UFSP2Q9NUQ7 469 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 HHLA2Q9UM44 414 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 PPP1R3CQ9UQK1 317 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 NOP16Q9Y3C1 178 aaKnown RBP11.16□□□□□ -0.62
GTF3A-209ENST00000640289 NOTCH2Q04721 2471 aa11.16□□□□□ -0.62
GTF3A-209ENST00000640289 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.15□□□□□ -0.62
GTF3A-209ENST00000640289 ANXA2P2A6NMY6 339 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 DHRS7CA6NNS2 312 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 NRASP01111 189 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 GRPP07492 148 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 CSF3P09919 207 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 CELP19835 753 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 GATA4P43694 442 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 DSCR9P59020 149 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 TAS2R43P59537 309 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 MRPS11P82912 194 aaKnown RBP11.15□□□□□ -0.62
GTF3A-209ENST00000640289 RIN1Q13671 783 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 HFEQ30201 348 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 PLCXD3Q63HM9 321 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 SPERTQ8NA61 448 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 OR13C3Q8NGS6 347 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.62
GTF3A-209ENST00000640289 OR5P3Q8WZ94 311 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 GHSRQ92847 366 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 ITFG2Q969R8 447 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 FGGYQ96C11 551 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 RNF170Q96K19 258 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 PGLYRP3Q96LB9 341 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 PIMREGQ9BSJ6 248 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 DLL4Q9NR61 685 aa11.15□□□□□ -0.62
GTF3A-209ENST00000640289 PRRC2AP48634 2157 aaKnown RBP11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ANKRD17O75179 2603 aaKnown RBP11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ANKRD61A6NGH8 418 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 PLPP2O43688 288 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 HSMCR30P0CW71 290 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF12P17014 697 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF20P17024 532 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 SOX2P48431 317 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 GPM6AP51674 278 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 HOXA4Q00056 320 aaPredicted RBP11.14□□□□□ -0.63
GTF3A-209ENST00000640289 BDH1Q02338 343 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 EMX1Q04741 257 aaPredicted RBP11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ACSM1Q08AH1 577 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF154Q13106 437 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 TBCEQ15813 527 aaPredicted RBP11.14□□□□□ -0.63
GTF3A-209ENST00000640289 UBE2V2Q15819 145 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 CEACAM21Q3KPI0 293 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 AVPI1Q5T686 147 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF826PQ6ZT77 177 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 KCTD8Q6ZWB6 473 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 CELF2-AS1Q8N7Q2 184 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 OR1M1Q8NGA1 313 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 NPRL2Q8WTW4 380 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 HIST1H2AAQ96QV6 131 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 MICU1Q9BPX6 476 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 RTL8AQ9BWD3 113 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 BPESC1Q9GZL8 116 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 CHST5Q9GZS9 411 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ACOT13Q9NPJ3 140 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 TMEM106BQ9NUM4 274 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 C14orf119Q9NWQ9 140 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 DHDHQ9UQ10 334 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF281Q9Y2X9 895 aa11.14□□□□□ -0.63
GTF3A-209ENST00000640289 A6NLC8 198 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 ZNF732B4DXR9 585 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 RNF223E7ERA6 249 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 NDUFS8O00217 210 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 PPIHO43447 177 aaKnown RBP11.13□□□□□ -0.63
GTF3A-209ENST00000640289 PTBP3O95758 552 aaKnown RBP11.13□□□□□ -0.63
GTF3A-209ENST00000640289 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
GTF3A-209ENST00000640289 GIFP27352 417 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 GPR6P46095 362 aaPredicted RBP11.13□□□□□ -0.63
GTF3A-209ENST00000640289 CHN2P52757 468 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 RPS11P62280 158 aaKnown RBP eCLIP11.13□□□□□ -0.63
GTF3A-209ENST00000640289 MZT1Q08AG7 82 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 SPNS3Q6ZMD2 512 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 C11orf53Q8IXP5 236 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 SPARTQ8N0X7 666 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 CIARTQ8N365 385 aaPredicted RBP11.13□□□□□ -0.63
GTF3A-209ENST00000640289 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 TRMT10AQ8TBZ6 339 aaKnown RBP11.13□□□□□ -0.63
GTF3A-209ENST00000640289 GPR148Q8TDV2 347 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 C10orf35Q96D05 121 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 ORAI1Q96D31 301 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 OPALINQ96PE5 141 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 ABCB9Q9NP78 766 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 C1orf123Q9NWV4 160 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 LRCH1Q9Y2L9 728 aa11.13□□□□□ -0.63
GTF3A-209ENST00000640289 A0A096LNT2 108 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms