RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	ATG101	Q9BSB4	218 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ELL3	Q9HB65	397 aa	Predicted RBP	12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	PARPBP	Q9NWS1	579 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR52A1	Q9UKL2	312 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ROS1	P08922	2347 aa		12.14	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CFI	P05156	583 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SNRPC	P09234	159 aa	Known RBP	12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	MAS1L	P35410	378 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	DHPS	P49366	369 aa	Predicted RBP	12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	TOMM34	Q15785	309 aa	Predicted RBP	12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ACTBL2	Q562R1	376 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	VAX1	Q5SQQ9	334 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RTN4RL2	Q86UN3	420 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	MAFIP	Q8WZ33	124 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	POM121	Q96HA1	1249 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	S100A13	Q99584	98 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	PRSS37	A4D1T9	235 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	APBB3	O95704	486 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CT45A8	P0DMV1	189 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CT45A9	P0DMV2	189 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZNF708	P17019	499 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	GFER	P55789	205 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZP2	Q05996	745 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	NSDHL	Q15738	373 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CD226	Q15762	336 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CT45A2	Q5DJT8	189 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	HEPN1	Q6WQI6	88 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR52N5	Q8NH56	324 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	UNKL	Q9H9P5	680 aa	Known RBP	12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CEACAM18	A8MTB9	384 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SOX1	O00570	391 aa	Predicted RBP	12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	GNAL	P38405	381 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RAP1A	P62834	184 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SCRT1	Q9BWW7	348 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CNTNAP3	Q9BZ76	1288 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CRISPLD2	Q9H0B8	497 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SLC2A4RG	Q9NR83	387 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	VDAC3	Q9Y277	283 aa		12.13	□□□□□ -0.47
KCNMA1-238	ENST00000638514	P2RY10	O00398	339 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	HSD11B1	P28845	292 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CAMLG	P49069	296 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	TMEM33	P57088	247 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RPS23	P62266	143 aa	Known RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	QRFP	P83859	136 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ALKBH2	Q6NS38	261 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CBLN3	Q6UW01	205 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SLC22A24	Q8N4F4	322 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR52N4	Q8NGI2	321 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	GPBAR1	Q8TDU6	330 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RTBDN	Q9BSG5	229 aa	Predicted RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	MRPL37	Q9BZE1	423 aa	Known RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	FAM60A	Q9NP50	221 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	G6PC2	Q9NQR9	355 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	MUC22	E2RYF6	1773 aa	Predicted RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514		H3BML4	177 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SCD	O00767	359 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZNF354A	O60765	605 aa	Predicted RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	HCK	P08631	526 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	THBS4	P35443	961 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	EMP2	P54851	167 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR8G1	Q15617	311 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	GFI1B	Q5VTD9	330 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514		Q7L0L9	218 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR13C9	Q8NGT0	318 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	FGGY	Q96C11	551 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SLC35B3	Q9H1N7	401 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	S1PR5	Q9H228	398 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	LUZP4	Q9P127	313 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	HDGFL3	Q9Y3E1	203 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	IGLV1-36	A0A0B4J1U3	117 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ISG15	P05161	165 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CXCR1	P25024	350 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	UCP2	P55851	309 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	INSM1	Q01101	510 aa	Predicted RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	HYAL1	Q12794	435 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	COX15	Q7KZN9	410 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	PNLDC1	Q8NA58	520 aa	Known RBP	12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR5H2	Q8NGV7	314 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	DOK5	Q9P104	306 aa		12.12	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CACNA1H	O95180	2353 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	C17orf105	B2RV13	164 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	SRSF10	O75494	262 aa	Known RBP	12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RNH1	P13489	461 aa	Known RBP	12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CTLA4	P16410	223 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	CEBPG	P53567	150 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	C16orf47	Q6ZP98	133 aa	Predicted RBP	12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	MED25	Q71SY5	747 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	PEG10	Q86TG7	708 aa	Known RBP	12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	NICN1	Q9BSH3	213 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	FOXQ1	Q9C009	403 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	ZNF217	O75362	1048 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	OR13C7	P0DN81	318 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	BLK	P51451	505 aa		12.11	□□□□□ -0.47
KCNMA1-238	ENST00000638514	RPL27	P61353	136 aa	Known RBP	12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms