RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 GLAP06280 429 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 SP6Q3SY56 376 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 SPINK14Q6IE38 97 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 OR2Y1Q8NGV0 311 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 HPSE2Q8WWQ2 592 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 SCGB2A1O75556 95 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 IGHA1P01876 353 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 ERGP11308 486 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 THBS4P35443 961 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 ST3GAL2Q16842 350 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 H3F3CQ6NXT2 135 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 WDR74Q6RFH5 385 aaPredicted RBP12.8□□□□□ -0.36
SCARB2-208ENST00000638372 YIPF5Q969M3 257 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 FRRS1LQ9P0K9 344 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 RNF150Q9ULK6 438 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 ZFP92A6NM28 416 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 FIGNL2A6NMB9 653 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 ICMTO60725 284 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 IGKV1D-16P01601 117 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 CCL2P13500 99 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 CBR1P16152 277 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 SPINK2P20155 84 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 ACAA2P42765 397 aaKnown RBP12.8□□□□□ -0.36
SCARB2-208ENST00000638372 SPANXN5Q5MJ07 72 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 CDH26Q8IXH8 852 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 C9orf40Q8IXQ3 194 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 WDSUB1Q8N9V3 476 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 OR1J1Q8NGS3 322 aa12.8□□□□□ -0.36
SCARB2-208ENST00000638372 ZNF275Q9NSD4 429 aaPredicted RBP12.8□□□□□ -0.36
SCARB2-208ENST00000638372 SERPINE3A8MV23 424 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 C4orf51C9J302 202 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 NDUFB6O95139 128 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 ELLP55199 621 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 DRAM2Q6UX65 266 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 DEFB124Q8NES8 71 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 LIN37Q96GY3 246 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 ACSM4P0C7M7 580 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 RPL12P30050 165 aaKnown RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 FUT6P51993 359 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 IRF3Q14653 427 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 PABPC1L2AQ5JQF8 200 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 TSEN54Q7Z6J9 526 aaKnown RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 WFDC8Q8IUA0 241 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 FBXW5Q969U6 566 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 APOBEC3DQ96AK3 386 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 PLPPR2Q96GM1 343 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 MIXL1Q9H2W2 232 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 TMEM231Q9H6L2 316 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 C12orf10Q9HB07 376 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 PMS2P1A4D2B8 440 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 M0R1B8 84 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 NME2P1O60361 137 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 HBE1P02100 147 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 CD80P33681 288 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 GLDNQ6ZMI3 551 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 TCTE3Q8IZS6 198 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 TMEM229BQ8NBD8 167 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 OR1S2Q8NGQ3 325 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 C20orf24Q9BUV8 137 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 CNTD2Q9H8S5 307 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 PURGQ9UJV8 347 aaKnown RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 ICAM5Q9UMF0 924 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 TOX3O15405 576 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 KLK10O43240 276 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 SNRNP200O75643 2136 aaKnown RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 RGS11O94810 467 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 PTGFRP43088 359 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 ZNF718Q3SXZ3 478 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 TOR2AQ5JU69 321 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 H2BFWTQ7Z2G1 175 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 CXorf67Q86X51 503 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 DTWD2Q8NBA8 298 aa12.79□□□□□ -0.36
SCARB2-208ENST00000638372 MN1Q10571 1320 aaPredicted RBP12.79□□□□□ -0.36
SCARB2-208ENST00000638372 PLXNA1Q9UIW2 1896 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 MKRN2OSH3BPM6 223 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 OR13C7P0DN81 318 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 FUT5Q11128 374 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 TMEM128Q5BJH2 165 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 HIST2H3PS2Q5TEC6 136 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 PRAMEF5Q5TYX0 476 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 PRAMEF6Q5VXH4 476 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 OR2T2Q6IF00 324 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 PILRAQ9UKJ1 303 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 IGHV5-10-1A0A0J9YXX1 117 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 LRRC30A6NM36 301 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 TXNL1O43396 289 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 SSSCA1O60232 199 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 HLA-DOBP13765 273 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 CD96P40200 585 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 SSPNQ14714 243 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 TMEM182Q6ZP80 229 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-208ENST00000638372 GALNT16Q8N428 558 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 GVQW1Q8N7I0 195 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 HIPK2Q9H2X6 1198 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 A8MXE2 369 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 H3BP45 60 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 TMEM127O75204 238 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 DHRS3O75911 302 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 CTSBP07858 339 aa12.78□□□□□ -0.36
SCARB2-208ENST00000638372 C6orf201Q7Z4U5 140 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms