RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 IL15RAQ13261 267 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 SURF2Q15527 256 aaPredicted RBP17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 EIF5AL1Q6IS14 154 aaKnown RBP17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 WDR74Q6RFH5 385 aaPredicted RBP17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 BHLHE23Q8NDY6 225 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR14K1Q8NGZ2 314 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 PRR13Q9NZ81 148 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 WIF1Q9Y5W5 379 aa17.73■□□□□ 0.43
SYNGAP1-227ENST00000638142 TAAR5O14804 337 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 MBTPS2O43462 519 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 PRF1P14222 555 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 RPS2P15880 293 aaKnown RBP17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 ALDH3B1P43353 468 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 DHPSP49366 369 aaPredicted RBP17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 SNU13P55769 128 aaKnown RBP17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 CSNK2A1P68400 391 aaPredicted RBP17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 ECH1Q13011 328 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 SMAD4Q13485 552 aaKnown RBP17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 RAB32Q13637 225 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 HIST3H3Q16695 136 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 CARD17Q5XLA6 110 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 CSNK2A3Q8NEV1 391 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR51T1Q8NGJ9 327 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 EMG1Q92979 244 aaKnown RBP17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 SMIM8Q96KF7 97 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 OXGR1Q96P68 337 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 ST6GALNAC5Q9BVH7 336 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 MEMO1Q9Y316 297 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 UNC13CQ8NB66 2214 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 ASXL3Q9C0F0 2248 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 PTGDSP41222 190 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 GFOD2Q3B7J2 385 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 AVPI1Q5T686 147 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 RABEPKQ7Z6M1 372 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 LMAN1LQ9HAT1 526 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 ACKR4Q9NPB9 350 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 EHFQ9NZC4 300 aa17.72■□□□□ 0.43
SYNGAP1-227ENST00000638142 FOXI3A8MTJ6 420 aaPredicted RBP17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 HTR3BO95264 441 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 APOC1P02654 83 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 IFNA4P05014 189 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 QDPRP09417 244 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 ANOS1P23352 680 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 MEOX2P50222 304 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 SKA3Q8IX90 412 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR51F2Q8NH61 342 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 OR5B2Q96R09 309 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 METTL7AQ9H8H3 244 aa17.71■□□□□ 0.43
SYNGAP1-227ENST00000638142 F12P00748 615 aaPredicted RBP17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 CRYBA1P05813 215 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF43P17038 809 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 GLRA1P23415 457 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 PTGFRP43088 359 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 ARL6IP1Q15041 203 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 KISS1Q15726 138 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF239Q16600 458 aaKnown RBP17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 NECAB3Q96P71 396 aaPredicted RBP17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 OR2S2Q9NQN1 319 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 B3GALT1Q9Y5Z6 326 aa17.71■□□□□ 0.42
SYNGAP1-227ENST00000638142 ADAMTS20P59510 1910 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 A0A1W2PNR3 127 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 SERPINE3A8MV23 424 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 SPP1P10451 314 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 CTSSP25774 331 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 CAV2P51636 162 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 SMAD2Q15796 467 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 NRIP2Q9BQI9 281 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 RHOFQ9HBH0 211 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 RCC2Q9P258 522 aaKnown RBP17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF726A6NNF4 738 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 SDCBPO00560 298 aaPredicted RBP17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 OPN1LWP04000 364 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 NAT2P11245 290 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 NKAIN1Q4KMZ8 207 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 CYYR1Q96J86 154 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 MICU1Q9BPX6 476 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 WDR77Q9BQA1 342 aaPredicted RBP17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 TMEM231Q9H6L2 316 aa17.7■□□□□ 0.42
SYNGAP1-227ENST00000638142 MEX3AA1L020 520 aaKnown RBP17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 ZNF814B7Z6K7 855 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 CA11O75493 328 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 IGLV3-1P01715 115 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 BLVRBP30043 206 aaPredicted RBP17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 PDZK1IP1Q13113 114 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 OR10G3Q8NGC4 313 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 RXFP4Q8TDU9 374 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 SLC25A43Q8WUT9 341 aaPredicted RBP17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 PECRQ9BY49 303 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 HRH4Q9H3N8 390 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 SPAG17Q6Q759 2223 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 RALGAPA1Q6GYQ0 2036 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 LOC102725191A0A1B0GVB3 256 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 HPNP05981 417 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 THBS4P35443 961 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 ECI1P42126 302 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 S100A10P60903 97 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 CHRFAM7AQ494W8 412 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 FAM69BQ5VUD6 431 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 RTL6Q6ICC9 239 aa17.69■□□□□ 0.42
SYNGAP1-227ENST00000638142 OR2M3Q8NG83 312 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms