RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SSX6Q7RTT6 188 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 ZDHHC13Q8IUH4 622 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 FAM216BQ8N7L0 139 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 CSNK2A3Q8NEV1 391 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 OR5T2Q8NGG2 359 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 TMEM163Q8TC26 289 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 OR5P3Q8WZ94 311 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 GCDHQ92947 438 aaPredicted RBP14.69□□□□□ -0.06
PNKP-230ENST00000638016 DUS3LQ96G46 650 aaKnown RBP14.69□□□□□ -0.06
PNKP-230ENST00000638016 FAM71F1Q96KD3 344 aaPredicted RBP14.69□□□□□ -0.06
PNKP-230ENST00000638016 JMJD8Q96S16 334 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 CNN2Q99439 309 aaKnown RBP14.69□□□□□ -0.06
PNKP-230ENST00000638016 APOL4Q9BPW4 351 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 MICU1Q9BPX6 476 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 PCGF1Q9BSM1 259 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 TLNRD1Q9H1K6 362 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 RNPEPL1Q9HAU8 725 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 SNTG1Q9NSN8 517 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 IKZF2Q9UKS7 526 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 OAZ3Q9UMX2 235 aa14.69□□□□□ -0.06
PNKP-230ENST00000638016 TMEM89A2RUT3 159 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 TMPRSS2O15393 492 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 ENSAO43768 121 aaKnown RBP14.68□□□□□ -0.06
PNKP-230ENST00000638016 ATP5HO75947 161 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 CST4P01036 141 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 CFPP27918 469 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 CXCR4P61073 352 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 MZT1Q08AG7 82 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 CEP78Q5JTW2 689 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 KCTD8Q6ZWB6 473 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 COMMD2Q86X83 199 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 SLC35F2Q8IXU6 374 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 GALNT4Q8N4A0 578 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 OR51E1Q8TCB6 317 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 PYDC1Q8WXC3 89 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 ST8SIA4Q92187 359 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 TBX15Q96SF7 602 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 TBX5Q99593 518 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 RTL8AQ9BWD3 113 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 PBOV1Q9GZY1 135 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 GPR84Q9NQS5 396 aa14.68□□□□□ -0.06
PNKP-230ENST00000638016 ANXA2P2A6NMY6 339 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 AKR7A2O43488 359 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 SRSF10O75494 262 aaKnown RBP14.67□□□□□ -0.06
PNKP-230ENST00000638016 RHBDL1O75783 438 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 TTRP02766 147 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 MMP9P14780 707 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 CFHR2P36980 270 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 GPM6AP51674 278 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 IL5RAQ01344 420 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 ROM1Q03395 351 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 PRB3Q04118 309 aaPredicted RBP14.67□□□□□ -0.06
PNKP-230ENST00000638016 BAMBIQ13145 260 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 KCNJ8Q15842 424 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 NXNL2Q5VZ03 156 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 KCTD18Q6PI47 426 aaPredicted RBP14.67□□□□□ -0.06
PNKP-230ENST00000638016 BTN2A1Q7KYR7 527 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 ASRGL1Q7L266 308 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 ZDHHC23Q8IYP9 409 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 ZNF679Q8IYX0 411 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 SCCPDHQ8NBX0 429 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 FAM81AQ8TBF8 368 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 RNF170Q96K19 258 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 MROQ9BYG7 248 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 RIBC2Q9H4K1 309 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 GTF2A1LQ9UNN4 478 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 MPC1Q9Y5U8 109 aa14.67□□□□□ -0.06
PNKP-230ENST00000638016 SRRM5B3KS81 715 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 IGLV3-1P01715 115 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 PPIAL4GP0DN37 164 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 FAHP16930 419 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 DCTDP32321 178 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 NPY4RP50391 375 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 RIDAP52758 137 aaKnown RBP14.66□□□□□ -0.06
PNKP-230ENST00000638016 IKZF1Q13422 519 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 MICBQ29980 383 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 DEFB112Q30KQ8 113 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 ZNF322Q6U7Q0 402 aaPredicted RBP14.66□□□□□ -0.06
PNKP-230ENST00000638016 RBMS3Q6XE24 437 aaKnown RBP14.66□□□□□ -0.06
PNKP-230ENST00000638016 OR51G2Q8NGK0 314 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 PRRG3Q9BZD7 231 aa14.66□□□□□ -0.06
PNKP-230ENST00000638016 MRM2Q9UI43 246 aaKnown RBP14.66□□□□□ -0.06
PNKP-230ENST00000638016 A0A0U1RQV5 110 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 ZNF816-ZNF321PA0A0X1KG74 233 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 A6NIN4 97 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 ZNF879B4DU55 563 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 H3BSH0 61 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 CIB2O75838 187 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 PRTN3P24158 256 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 COMPP49747 757 aaPredicted RBP14.65□□□□□ -0.06
PNKP-230ENST00000638016 DLX1P56177 255 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 ARF6P62330 175 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 SLC9A3R2Q15599 337 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 AWAT1Q58HT5 328 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 STUMQ69YW2 141 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 DEGS2Q6QHC5 323 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 C9orf139Q6ZV77 190 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 PDZD9Q8IXQ8 264 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 FTMTQ8N4E7 242 aa14.65□□□□□ -0.06
PNKP-230ENST00000638016 ASB17Q8WXJ9 295 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms