RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 LHFPL2Q6ZUX7 228 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
CLN6-219ENST00000637329 LIX1LQ8IVB5 337 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 OR56B2PQ8NGI1 322 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 SRRQ9GZT4 340 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 RHBDL2Q9NX52 303 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 EXTL2Q9UBQ6 330 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 GHRLQ9UBU3 117 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 FBLN5Q9UBX5 448 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
CLN6-219ENST00000637329 CREBBPQ92793 2442 aa13.23□□□□□ -0.29
CLN6-219ENST00000637329 IGHV2OR16-5A0A0B4J2B6 119 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 GGT3PA6NGU5 568 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 CCL21O00585 134 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 GMDSO60547 372 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 UPK1BO75841 260 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 AGFG2O95081 481 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 NRASP01111 189 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 SELEP16581 610 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 RAB6AP20340 208 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 MNDAP41218 407 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 RAD52P43351 418 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 ALDH3B1P43353 468 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 ART1P52961 327 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 UCP2P55851 309 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 CLDN12P56749 244 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 P2RY14Q15391 338 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 TAB1Q15750 504 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 OR4M1Q8NGD0 313 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 C15orf40Q8WUR7 153 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 HAVCR1Q96D42 359 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 PPP1R3EQ9H7J1 279 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 CNTD2Q9H8S5 307 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 COQ3Q9NZJ6 369 aa13.22□□□□□ -0.29
CLN6-219ENST00000637329 NOTCH2Q04721 2471 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 FLNCQ14315 2725 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 A0A0A6YYH2 397 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 A6NJ64 397 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 CD300LBA8K4G0 201 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 LDLRAD4O15165 306 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 SCGNO76038 276 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 RAC2P15153 192 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 PITPNBP48739 271 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 FUT6P51993 359 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 NAAAQ02083 359 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 FAM27E3Q08E93 113 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 IL18Q14116 193 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 KISS1Q15726 138 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 OR2W3Q7Z3T1 314 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 OR51D1Q8NGF3 324 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 OR4D6Q8NGJ1 314 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 SYNPRQ8TBG9 265 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 GPER1Q99527 375 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 POFUT1Q9H488 388 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 GPR173Q9NS66 373 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 SLC7A11Q9UPY5 501 aa13.21□□□□□ -0.29
CLN6-219ENST00000637329 MRPS28Q9Y2Q9 187 aaKnown RBP13.21□□□□□ -0.29
CLN6-219ENST00000637329 TMEM272A0A1B0GTI8 110 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 ISPDA4D126 451 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 CRYAAP02489 173 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 RBP2P50120 134 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 PITPNAQ00169 270 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 HLXQ14774 488 aaPredicted RBP13.2□□□□□ -0.3
CLN6-219ENST00000637329 FAM189A2Q15884 450 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 PLCXD3Q63HM9 321 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 AWAT2Q6E213 333 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 SEZ6L2Q6UXD5 910 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 ZDHHC23Q8IYP9 409 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 CMTM4Q8IZR5 234 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 GALNT11Q8NCW6 608 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 OR1J1Q8NGS3 322 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 BORCS8Q96FH0 119 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
CLN6-219ENST00000637329 LRRC46Q96FV0 321 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 PAPOLGQ9BWT3 736 aaKnown RBP13.2□□□□□ -0.3
CLN6-219ENST00000637329 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 MRPL15Q9P015 296 aaKnown RBP13.2□□□□□ -0.3
CLN6-219ENST00000637329 NOP16Q9Y3C1 178 aaKnown RBP13.2□□□□□ -0.3
CLN6-219ENST00000637329 SPEF1Q9Y4P9 236 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 MPC1Q9Y5U8 109 aa13.2□□□□□ -0.3
CLN6-219ENST00000637329 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
CLN6-219ENST00000637329 CTDSPLO15194 276 aa13.19□□□□□ -0.3
CLN6-219ENST00000637329 FAM157BP0CG42 384 aa13.19□□□□□ -0.3
CLN6-219ENST00000637329 ZNF83P51522 516 aa13.19□□□□□ -0.3
CLN6-219ENST00000637329 RPS23P62266 143 aaKnown RBP13.19□□□□□ -0.3
CLN6-219ENST00000637329 MRPS10P82664 201 aaKnown RBP13.19□□□□□ -0.3
CLN6-219ENST00000637329 C2orf76Q3KRA6 126 aa13.19□□□□□ -0.3
CLN6-219ENST00000637329 PYDC2Q56P42 97 aa13.19□□□□□ -0.3
CLN6-219ENST00000637329 SDHCQ99643 169 aaPredicted RBP13.19□□□□□ -0.3
CLN6-219ENST00000637329 C1QTNF6Q9BXI9 259 aa13.19□□□□□ -0.3
CLN6-219ENST00000637329 ZGRF1Q86YA3 2104 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 IQCF6A8MYZ5 107 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 M0R1B8 84 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 HLA-DQB1P01920 261 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 NAT2P11245 290 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 CALCRP30988 508 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 PTGFRP43088 359 aa13.18□□□□□ -0.3
CLN6-219ENST00000637329 OR3A4PP47883 348 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms