RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-215	ENST00000636674	TLNRD1	Q9H1K6	362 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	SEC61A2	Q9H9S3	476 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	KLRF1	Q9NZS2	232 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	ASH2L	Q9UBL3	628 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	RALGAPA1	Q6GYQ0	2036 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674		A0A1W2PP11	408 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	NAT2	P11245	290 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	ECI1	P42126	302 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	ECH1	Q13011	328 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	MFAP5	Q13361	173 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	ARFRP1	Q13795	201 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	PPA1	Q15181	289 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	RTL6	Q6ICC9	239 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	EIF5AL1	Q6IS14	154 aa	Known RBP	12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	TMEM88	Q6PEY1	159 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	CRIP3	Q6Q6R5	217 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674		Q6ZSR3	168 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	RABEPK	Q7Z6M1	372 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	UBALD2	Q8IYN6	164 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	PNLDC1	Q8NA58	520 aa	Known RBP	12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	BHLHE23	Q8NDY6	225 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	OR10C1	Q96KK4	312 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	OXGR1	Q96P68	337 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	TM2D1	Q9BX74	207 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	ACKR4	Q9NPB9	350 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	MLX	Q9UH92	298 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	MEMO1	Q9Y316	297 aa		12.81	□□□□□ -0.36
CLN6-215	ENST00000636674	TRBV11-1	A0A0K0K1C0	115 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	SERPINE3	A8MV23	424 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	ZNF705E	A8MWA4	302 aa	Predicted RBP	12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	SLC2A1	P11166	492 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	ANOS1	P23352	680 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	CDA	P32320	146 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	THBS4	P35443	961 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	RFC3	P40938	356 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	CAV2	P51636	162 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	RAB32	Q13637	225 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	SHE	Q5VZ18	495 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	SLC16A14	Q7RTX9	510 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	OR5L2	Q8NGL0	311 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	THAP3	Q8WTV1	239 aa	Predicted RBP	12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	SLC25A43	Q8WUT9	341 aa	Predicted RBP	12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	GPER1	Q99527	375 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	WDR77	Q9BQA1	342 aa	Predicted RBP	12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	NRIP2	Q9BQI9	281 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	SAV1	Q9H4B6	383 aa	Predicted RBP	12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	TRIO	O75962	3097 aa		12.8	□□□□□ -0.36
CLN6-215	ENST00000636674	RER1	O15258	196 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	HEXB	P07686	556 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	OR3A2	P47893	321 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	SNU13	P55769	128 aa	Known RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	FOXL2	P58012	376 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	CBLN2	Q8IUK8	224 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	ZFP57	Q9NU63	452 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	RCC2	Q9P258	522 aa	Known RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	ASXL3	Q9C0F0	2248 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	UNC13C	Q8NB66	2214 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	PMS2P1	A4D2B8	440 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	TOX3	O15405	576 aa	Predicted RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	RRP8	O43159	456 aa	Known RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	NR2C1	P13056	603 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	PI3	P19957	117 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	FKBP2	P26885	142 aa	Known RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	PTGFR	P43088	359 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	DHPS	P49366	369 aa	Predicted RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	LSM6	P62312	80 aa	Known RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	CSNK2A1	P68400	391 aa	Predicted RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	KISS1	Q15726	138 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	FAM57B	Q71RH2	274 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	ZNF283	Q8N7M2	679 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	CSNK2A3	Q8NEV1	391 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	DMBX1	Q8NFW5	382 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	OR2M3	Q8NG83	312 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	OR51F2	Q8NH61	342 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	MESP1	Q9BRJ9	268 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	ADAT1	Q9BUB4	502 aa	Known RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	METTL8	Q9H825	291 aa	Known RBP	12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	RHOF	Q9HBH0	211 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	TREM1	Q9NP99	234 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	EHF	Q9NZC4	300 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	HDGFL3	Q9Y3E1	203 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	POMT1	Q9Y6A1	747 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674		V9GYS6	101 aa		12.79	□□□□□ -0.36
CLN6-215	ENST00000636674	CEP192	Q8TEP8	1941 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674		A0A0U1RQV5	110 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	AQP7P3	A6NL99	342 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	ZNF814	B7Z6K7	855 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	GAPDH	P04406	335 aa	Known RBP	12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	HPN	P05981	417 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	NPBWR1	P48145	328 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	SULT1A2	P50226	295 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	RAB13	P51153	203 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	ZNF528	Q3MIS6	628 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	TMEM268	Q5VZI3	342 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	CCDC54	Q8NEL0	328 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	OR51T1	Q8NGJ9	327 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	PECR	Q9BY49	303 aa		12.78	□□□□□ -0.36
CLN6-215	ENST00000636674	PRR13	Q9NZ81	148 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms