RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 GABARAPL3Q9BY60 117 aa15.29■□□□□ 0.04
CLN6-214ENST00000636314 RIBC2Q9H4K1 309 aa15.29■□□□□ 0.04
CLN6-214ENST00000636314 TRRAPQ9Y4A5 3859 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 IGHV3OR15-7A0A075B7D8 119 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 A0A0U1RQV5 110 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 ZNF670-ZNF695F2Z2N8 137 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 ENSAO43768 121 aaKnown RBP15.28■□□□□ 0.04
CLN6-214ENST00000636314 LHBP01229 141 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 GYPAP02724 150 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 PPIAL4GP0DN37 164 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 CXCR4P61073 352 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 EFNB1P98172 346 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 TEX36Q5VZQ5 186 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 ZNF322Q6U7Q0 402 aaPredicted RBP15.28■□□□□ 0.04
CLN6-214ENST00000636314 RBMS3Q6XE24 437 aaKnown RBP15.28■□□□□ 0.04
CLN6-214ENST00000636314 KCTD8Q6ZWB6 473 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 FAM90A1Q86YD7 464 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 C11orf53Q8IXP5 236 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 ZDHHC23Q8IYP9 409 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 PKP2Q99959 881 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 RBM4BQ9BQ04 359 aaKnown RBP15.28■□□□□ 0.04
CLN6-214ENST00000636314 ZNF747Q9BV97 191 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 PBOV1Q9GZY1 135 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 TLNRD1Q9H1K6 362 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 ADGRL4Q9HBW9 690 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 ZNF69Q9UC07 566 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 TGP01266 2768 aa15.28■□□□□ 0.04
CLN6-214ENST00000636314 TRAV40A0A0B4J280 105 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 ZNF816-ZNF321PA0A0X1KG74 233 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 KIR2DS1A0A191URI9 304 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 TMEM210A6NLX4 147 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 C22orf46C9J442 243 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 CDIPTO14735 213 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 MAP2K3P46734 347 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 ACTR3P61158 418 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 MFGE8Q08431 387 aaPredicted RBP15.27■□□□□ 0.04
CLN6-214ENST00000636314 FOXL1Q12952 345 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 MICBQ29980 383 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 CD276Q5ZPR3 534 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 SHISA2Q6UWI4 295 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 OR51G2Q8NGK0 314 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 OR5P3Q8WZ94 311 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 UPRTQ96BW1 309 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 FAM71F1Q96KD3 344 aaPredicted RBP15.27■□□□□ 0.04
CLN6-214ENST00000636314 OSBPL10Q9BXB5 764 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 ZNF696Q9H7X3 374 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 MOB1AQ9H8S9 216 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 SMURF1Q9HCE7 757 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 CLN6Q9NWW5 311 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 NUFIP1Q9UHK0 495 aaKnown RBP15.27■□□□□ 0.04
CLN6-214ENST00000636314 GTF2A1LQ9UNN4 478 aa15.27■□□□□ 0.04
CLN6-214ENST00000636314 LOC110117498-PIK3R3F6TDL0 507 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 MUC1P15941 1255 aaPredicted RBP15.26■□□□□ 0.03
CLN6-214ENST00000636314 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
CLN6-214ENST00000636314 KPNB1Q14974 876 aaKnown RBP15.26■□□□□ 0.03
CLN6-214ENST00000636314 THAP5Q7Z6K1 395 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 OR51E1Q8TCB6 317 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 HPSE2Q8WWQ2 592 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 RNF170Q96K19 258 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 HIST1H2AAQ96QV6 131 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 MS4A7Q9GZW8 240 aaPredicted RBP15.26■□□□□ 0.03
CLN6-214ENST00000636314 GPR84Q9NQS5 396 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 HAO2Q9NYQ3 351 aa15.26■□□□□ 0.03
CLN6-214ENST00000636314 WARS2Q9UGM6 360 aaKnown RBP15.26■□□□□ 0.03
CLN6-214ENST00000636314 IGHV3OR16-10A0A075B7F0 116 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 SRRM5B3KS81 715 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 TNFRSF13BO14836 293 aaPredicted RBP15.25■□□□□ 0.03
CLN6-214ENST00000636314 IGHV4-38-2P0DP08 117 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 HKR1P10072 659 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 ATP6V1B1P15313 513 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 FGF12P61328 243 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 EGR3Q06889 387 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 POU4F2Q12837 409 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 BCL2L15Q5TBC7 163 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 ZFP1Q6P2D0 407 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 SIGLECL1Q8N7X8 197 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 OR8J1Q8NGP2 316 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 RPL3LQ92901 407 aaKnown RBP15.25■□□□□ 0.03
CLN6-214ENST00000636314 ITFG2Q969R8 447 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 APOL4Q9BPW4 351 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 ORC6Q9Y5N6 252 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 R4GMQ9 66 aa15.25■□□□□ 0.03
CLN6-214ENST00000636314 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.24■□□□□ 0.03
CLN6-214ENST00000636314 DVL1O14640 695 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 MAGEB4O15481 346 aaPredicted RBP15.24■□□□□ 0.03
CLN6-214ENST00000636314 IGLV3-1P01715 115 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 TTRP02766 147 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 HTR1FP30939 366 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 CFHR2P36980 270 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 GPM6AP51674 278 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 CDC42P60953 191 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 GMFBP60983 142 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 RIPPLY1Q0D2K3 151 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 PDLIM3Q53GG5 364 aaPredicted RBP15.24■□□□□ 0.03
CLN6-214ENST00000636314 WDR38Q5JTN6 314 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 CEP78Q5JTW2 689 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 PLEKHG7Q6ZR37 379 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 DOK3Q7L591 496 aa15.24■□□□□ 0.03
CLN6-214ENST00000636314 BCL6BQ8N143 479 aaPredicted RBP15.24■□□□□ 0.03
CLN6-214ENST00000636314 SCCPDHQ8NBX0 429 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms