RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SNED1Q8TER0 1413 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ICOSLGO75144 302 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR2F2O95006 317 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 FAM87AP0C7U9 286 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LIMS3P0CW19 117 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LIMS4P0CW20 117 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TEAD1P28347 426 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR2F1Q13607 317 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TOR2AQ5JU69 321 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ADPRHL1Q8NDY3 354 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR4S1Q8NGB4 309 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LINC00052Q96N35 136 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PARP12Q9H0J9 701 aaKnown RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 FZR1Q9UM11 496 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 AMDHD2Q9Y303 409 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 R4GMQ9 66 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 RGPD2P0DJD1 1756 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ZNFX1Q9P2E3 1918 aaKnown RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 A0A0U1RQS6 177 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ANKUB1A6NFN9 424 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SYNGR2O43760 224 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SS18L1O75177 396 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PDGFAP04085 211 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TCRBP04435 133 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 MGPP08493 103 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 UCNP55089 124 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF121P58317 390 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LYZP61626 148 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TRIP6Q15654 476 aaKnown RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PDZD11Q5EBL8 140 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TBC1D26Q86UD7 250 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ARIH2OSQ8N7S6 290 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR52N1Q8NH53 320 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SPPL3Q8TCT6 385 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 MYOZ3Q8TDC0 251 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SCARB1Q8WTV0 552 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 ASB16Q96NS5 453 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM38AQ9H6F2 299 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SLC25A22Q9H936 323 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SIRT3Q9NTG7 399 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 SLC45A2Q9UMX9 530 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 MRPS16Q9Y3D3 137 aaKnown RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 COL16A1Q07092 1604 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 A0A0B4J293 547 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 H3BVH4 76 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 LANCL1O43813 399 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 HOXC4P09017 264 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 B4GALT1P15291 398 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OPRM1P35372 400 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CEACAM6P40199 344 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CD226Q15762 336 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 KTI12Q96EK9 354 aaPredicted RBP5.02□□□□□ -1.61
SCN1A-209ENST00000635750 OR2J1Q9GZK6 312 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 PBOV1Q9GZY1 135 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 CBY1Q9Y3M2 126 aa5.02□□□□□ -1.61
SCN1A-209ENST00000635750 KRBA1A5PL33 1030 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 GYPAP02724 150 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RNASE1P07998 156 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 MYOGP15173 224 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 BCL3P20749 454 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PPICP45877 212 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 OR2B8PP59922 312 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 COL19A1Q14993 1142 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 FFAR4Q5NUL3 377 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RNASEKQ6P5S7 137 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SLCO4C1Q6ZQN7 724 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 LYSMD2Q8IV50 215 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 GALNT16Q8N428 558 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SYT8Q8NBV8 401 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 DUS3LQ96G46 650 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PDXPQ96GD0 296 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 EGLN2Q96KS0 407 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SGK494Q96LW2 274 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 TRAPPC1Q9Y5R8 145 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 APC2O95996 2303 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 FRG2CA6NGY1 282 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 HOXC11O43248 304 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 GNG7O60262 68 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PRF1P14222 555 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ARNTP27540 789 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PNLIPRP2P54317 469 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 HLA-BQ31612 363 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF789Q5FWF6 425 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 CST9Q5W186 159 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 NUFIP2Q7Z417 695 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PDPNQ86YL7 162 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 OR5AP2Q8NGF4 316 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RNF2Q99496 336 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 C12orf10Q9HB07 376 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 TREX1Q9NSU2 369 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 U3KQ87 197 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SCN11AQ9UI33 1791 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PRSS37A4D1T9 235 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 AQP8O94778 261 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SEMG1P04279 462 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PRSS1P07477 247 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SUMO3P55854 103 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 GAMTQ14353 236 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PYCR3Q53H96 274 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ASTLQ6HA08 431 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms