RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 THOC2Q8NI27 1593 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 MROH7Q68CQ1 1323 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 GREB1LQ9C091 1923 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 BCL9O00512 1426 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 KIAA1107Q9UPP5 1409 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 A0A087WUJ7 227 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 A0A1B0GW55 424 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 A0A1W2PPI3 338 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 FAM92AA1XBS5 289 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 FAM172BPA6NC97 362 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 FAM159BA6NKW6 160 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 C5orf58C9J3I9 102 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 CDC7O00311 574 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 PHYHO14832 338 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 MRPS12O15235 138 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 PDE6DO43924 150 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 CXCL13O43927 109 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SOX15O60248 233 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 UGT2B11O75310 529 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 LSM8O95777 96 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 PDYNP01213 254 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 IGF2P01344 180 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 IGHV4-39P01824 125 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 H1F0P07305 194 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUX4L2P0CJ85 424 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUX4L3P0CJ86 424 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUX4L5P0CJ88 424 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUX4L6P0CJ89 424 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUX4L7P0CJ90 424 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 ACP2P11117 423 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 GABRA1P14867 456 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 HIST1H1TP22492 207 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 AK4P27144 223 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 MARK3P27448 753 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 RPL12P30050 165 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 CEACAM8P31997 349 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 RPL4P36578 427 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 CD200P41217 278 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 LGALS7P47929 136 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SSR4P51571 173 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 CDKN2DP55273 166 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 TCTAP57738 103 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 RPS14P62263 151 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 PUDPQ08623 228 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SLC10A7Q0GE19 358 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 ST3GAL4Q11206 333 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 TCP10Q12799 353 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 MFAP5Q13361 173 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 LAGE3Q14657 143 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 GINS1Q14691 196 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 KIR2DS3Q14952 304 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SURF2Q15527 256 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 TRIP13Q15645 432 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 C4orf26Q17RF5 130 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUOXA1Q1HG43 343 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 HLA-DRB5Q30154 266 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 PLPPR5Q32ZL2 321 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 TIGITQ495A1 244 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 CARD16Q5EG05 197 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR2B11Q5JQS5 317 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DCAF12Q5T6F0 453 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SAMD13Q5VXD3 122 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 KCTD16Q68DU8 428 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR52E8Q6IFG1 317 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 TRIM40Q6P9F5 258 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DUX4L9Q6RFH8 374 aaPredicted RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 ATRAIDQ6UW56 229 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 WDR82Q6UXN9 313 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 FOXL2NBQ6ZUU3 175 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 ZBTB8OSQ8IWT0 167 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SKA3Q8IX90 412 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 IFT20Q8IY31 132 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 VKORC1L1Q8N0U8 176 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 ZADH2Q8N4Q0 377 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 EID2Q8N6I1 236 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR7A2PQ8NGA2 310 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR4F17Q8NGA8 305 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR10G9Q8NGN4 311 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR4C13Q8NGP0 309 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR4F5Q8NH21 305 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR4X1Q8NH49 305 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 RPLP0P6Q8NHW5 317 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OLIG1Q8TAK6 271 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 PIFOQ8TCI5 191 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SLC7A13Q8TCU3 470 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 TBCKQ8TEA7 893 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DOK4Q8TEW6 326 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 DNAJC9Q8WXX5 260 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 MRPS31Q92665 395 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 MRPL24Q96A35 216 aaKnown RBP2.44□□□□□ -2.02
PSPC1-208ENST00000635562 RAB3CQ96E17 227 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 BTF3L4Q96K17 158 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 FOPNLQ96NB1 174 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR4F4Q96R69 305 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 LPAR4Q99677 370 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 SIGMAR1Q99720 223 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 GABRG3Q99928 467 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 FOXC2Q99958 501 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 VPS25Q9BRG1 176 aa2.44□□□□□ -2.02
PSPC1-208ENST00000635562 OR11A1Q9GZK7 315 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms