RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 ZNF850A8MQ14 1090 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 SRSF10O75494 262 aaKnown RBP13.03□□□□□ -0.32
LINC00339-209ENST00000635450 FOXH1O75593 365 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 ZNF205O95201 554 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 FSTL3O95633 263 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 CST4P01036 141 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 FSHBP01225 129 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 TTRP02766 147 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 ACKR3P25106 362 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 PEX2P28328 305 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 HOXA4Q00056 320 aaPredicted RBP13.03□□□□□ -0.32
LINC00339-209ENST00000635450 RIPPLY1Q0D2K3 151 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 PRDX4Q13162 271 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 ZDHHC23Q8IYP9 409 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 ELMOD2Q8IZ81 293 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 C22orf15Q8WYQ4 148 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 PPP1R14AQ96A00 147 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 MMP26Q9NRE1 261 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 C1orf123Q9NWV4 160 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 AASSQ9UDR5 926 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 MIOXQ9UGB7 285 aa13.03□□□□□ -0.32
LINC00339-209ENST00000635450 ERICH4A6NGS2 130 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 CEACAM18A8MTB9 384 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 HAX1O00165 279 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 DHRS3O75911 302 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 RPS2P15880 293 aaKnown RBP13.02□□□□□ -0.33
LINC00339-209ENST00000635450 GABRB1P18505 474 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 CPT2P23786 658 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF85Q03923 595 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 KCNJ8Q15842 424 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 ESCO2Q56NI9 601 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 FAM201AQ5SY85 155 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 ZBTB37Q5TC79 503 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 TTC23Q5W5X9 447 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 KCTD8Q6ZWB6 473 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 ACBD7Q8N6N7 88 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 BOLLQ8N9W6 283 aaKnown RBP13.02□□□□□ -0.33
LINC00339-209ENST00000635450 DEFB108BQ8NET1 73 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 OR1M1Q8NGA1 313 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 CYGBQ8WWM9 190 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 ADI1Q9BV57 179 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 DCLRE1BQ9H816 532 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 TMEM165Q9HC07 324 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 ESM1Q9NQ30 184 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 ENPP5Q9UJA9 477 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 GNG8Q9UK08 70 aa13.02□□□□□ -0.33
LINC00339-209ENST00000635450 EXOGQ9Y2C4 368 aaKnown RBP13.02□□□□□ -0.33
LINC00339-209ENST00000635450 TMEM210A6NLX4 147 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 F5H0A9 414 aaPredicted RBP13.01□□□□□ -0.33
LINC00339-209ENST00000635450 TRAPPC2LH3BP13 241 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 IGLV3-1P01715 115 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 DBTP11182 482 aaKnown RBP13.01□□□□□ -0.33
LINC00339-209ENST00000635450 HILS1P60008 231 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF91Q05481 1191 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF404Q494X3 552 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 TP53I3Q53FA7 332 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF826PQ6ZT77 177 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 KCTD20Q7Z5Y7 419 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 CATSPERDQ86XM0 798 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 DHRSXQ8N5I4 330 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 ITPKCQ96DU7 683 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 RNF170Q96K19 258 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 TMEM246Q9BRR3 403 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 VCXQ9H320 206 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 C7orf69Q9H7B7 122 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 PPP1R3EQ9H7J1 279 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 TRIM36Q9NQ86 728 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 PIGLQ9Y2B2 252 aa13.01□□□□□ -0.33
LINC00339-209ENST00000635450 RPL36Q9Y3U8 105 aaKnown RBP13.01□□□□□ -0.33
LINC00339-209ENST00000635450 TRAV38-1A0A0B4J264 116 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 A0A1B0GVI7 797 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 LGALS8O00214 317 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 P2RY10O00398 339 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 FADS2O95864 444 aaKnown RBP13□□□□□ -0.33
LINC00339-209ENST00000635450 ACTA2P62736 377 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 ACTG2P63267 376 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 ELF3P78545 371 aaPredicted RBP13□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF154Q13106 437 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF684Q5T5D7 378 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 DCDC5Q6ZRR9 648 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 MOB3CQ70IA8 216 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 DOK3Q7L591 496 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 TEX29Q8N6K0 151 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 SETD9Q8NE22 299 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 OR8B3Q8NGG8 313 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 OR5P3Q8WZ94 311 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 RORBQ92753 470 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 LGALS12Q96DT0 336 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 NEIL1Q96FI4 390 aaPredicted RBP13□□□□□ -0.33
LINC00339-209ENST00000635450 OR8B2Q96RD0 313 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 RNPEPL1Q9HAU8 725 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 AMBNQ9NP70 447 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 SLC22A13Q9Y226 551 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 LRCH1Q9Y2L9 728 aa13□□□□□ -0.33
LINC00339-209ENST00000635450 OOEPA6NGQ2 149 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 C3orf80F5H4A9 247 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 J3QLI3 93 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 J3QRE1 110 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms