RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 R4GMQ9 66 aa11.85□□□□□ -0.51
PNKP-223ENST00000629179 TRAV38-1A0A0B4J264 116 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 ZNF816-ZNF321PA0A0X1KG74 233 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 OOEPA6NGQ2 149 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 CDIPTO14735 213 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 TNFRSF13BO14836 293 aaPredicted RBP11.84□□□□□ -0.51
PNKP-223ENST00000629179 ENTPD6O75354 484 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 RGS9O75916 674 aaPredicted RBP11.84□□□□□ -0.51
PNKP-223ENST00000629179 RPP14O95059 124 aaKnown RBP11.84□□□□□ -0.51
PNKP-223ENST00000629179 BAG2O95816 211 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 IGLV3-1P01715 115 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 GYPAP02724 150 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 OR2T7P0C7T2 308 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 EPHA1P21709 976 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 PSMB10P40306 273 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 PAX2Q02962 417 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 WDR25Q64LD2 544 aaPredicted RBP11.84□□□□□ -0.51
PNKP-223ENST00000629179 WDR82Q6UXN9 313 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 ZBTB49Q6ZSB9 765 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 FAM90A1Q86YD7 464 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 PHC2Q8IXK0 858 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 TEX29Q8N6K0 151 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 SEMA6DQ8NFY4 1073 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 OR2T27Q8NH04 317 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 HPSE2Q8WWQ2 592 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 RPL3LQ92901 407 aaKnown RBP11.84□□□□□ -0.51
PNKP-223ENST00000629179 RFKQ969G6 155 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 SEH1LQ96EE3 360 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 TLNRD1Q9H1K6 362 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 RASSF4Q9H2L5 321 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 CTSZQ9UBR2 303 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 CLN8Q9UBY8 286 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 OR52A1Q9UKL2 312 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 SLC22A13Q9Y226 551 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 AUP1Q9Y679 476 aa11.84□□□□□ -0.51
PNKP-223ENST00000629179 ADAM20O43506 726 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 TCF21O43680 179 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 FSHBP01225 129 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 KRT8P05787 483 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 FAHP16930 419 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 GMFBP60983 142 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 SNRPGP62308 76 aaKnown RBP11.83□□□□□ -0.52
PNKP-223ENST00000629179 ELF3P78545 371 aaPredicted RBP11.83□□□□□ -0.52
PNKP-223ENST00000629179 ZNF85Q03923 595 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 PAX8Q06710 450 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 RIPPLY1Q0D2K3 151 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 TMED1Q13445 227 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 KCNJ8Q15842 424 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 CEP78Q5JTW2 689 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 ZNF684Q5T5D7 378 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 BCL2L15Q5TBC7 163 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 LIPNQ5VXI9 398 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 KCTD8Q6ZWB6 473 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 MOB3CQ70IA8 216 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 KRT74Q7RTS7 529 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 THAP5Q7Z6K1 395 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 ZDHHC23Q8IYP9 409 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 ELMOD2Q8IZ81 293 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 SCCPDHQ8NBX0 429 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 RAB40AQ8WXH6 277 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 HIST1H2AAQ96QV6 131 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 ABCB9Q9NP78 766 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 PIGLQ9Y2B2 252 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 GMPPBQ9Y5P6 360 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 SNX5Q9Y5X3 404 aa11.83□□□□□ -0.52
PNKP-223ENST00000629179 IGHV2-70DA0A0C4DH43 119 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 A0A1B0GTI1 187 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 METTL15A6NJ78 407 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 TMEM210A6NLX4 147 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 ZNF732B4DXR9 585 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
PNKP-223ENST00000629179 P2RY10O00398 339 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 DHRS3O75911 302 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 ATP6V1B1P15313 513 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 CFHR2P36980 270 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 MTNR1AP48039 350 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 GPM6AP51674 278 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 OCLNQ16625 522 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 ODF4Q2M2E3 257 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 FAM76BQ5HYJ3 339 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 SLC25A30Q5SVS4 291 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 TEX36Q5VZQ5 186 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 DACT3Q96B18 629 aaPredicted RBP11.82□□□□□ -0.52
PNKP-223ENST00000629179 RNFT2Q96EX2 444 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 TECTBQ96PL2 329 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 NUDT16L1Q9BRJ7 211 aaKnown RBP11.82□□□□□ -0.52
PNKP-223ENST00000629179 MRI1Q9BV20 369 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 MOB1AQ9H8S9 216 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 TRIM36Q9NQ86 728 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 ERVK-18Q9QC07 812 aa11.82□□□□□ -0.52
PNKP-223ENST00000629179 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.82□□□□□ -0.52
PNKP-223ENST00000629179 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
PNKP-223ENST00000629179 SRRM5B3KS81 715 aa11.81□□□□□ -0.52
PNKP-223ENST00000629179 C22orf46C9J442 243 aa11.81□□□□□ -0.52
PNKP-223ENST00000629179 H3BSH0 61 aa11.81□□□□□ -0.52
PNKP-223ENST00000629179 NDUFA2O43678 99 aa11.81□□□□□ -0.52
PNKP-223ENST00000629179 MTRF1O75570 445 aaKnown RBP11.81□□□□□ -0.52
PNKP-223ENST00000629179 FCN3O75636 299 aa11.81□□□□□ -0.52
PNKP-223ENST00000629179 SULT1C4O75897 302 aa11.81□□□□□ -0.52
PNKP-223ENST00000629179 VENTXO95231 258 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms