RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 SPHARQ15513 63 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 MED22Q15528 200 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 TBCEQ15813 527 aaPredicted RBP12.48□□□□□ -0.41
PNKP-221ENST00000627317 CARTPTQ16568 116 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 KCTD21Q4G0X4 260 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 CLEC2AQ6UVW9 174 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 ZDHHC23Q8IYP9 409 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 SVOPQ8N4V2 548 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 ZNF525Q8N782 197 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 MAPK1IP1LQ8NDC0 245 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 OR13C3Q8NGS6 347 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 OR14K1Q8NGZ2 314 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 OR8S1Q8NH09 359 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 UBASH3BQ8TF42 649 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 PIGCQ92535 297 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 DVL3Q92997 716 aaPredicted RBP12.48□□□□□ -0.41
PNKP-221ENST00000627317 SMIM19Q96E16 107 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 OR2V2Q96R30 315 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 OR5M11Q96RB7 305 aa12.48□□□□□ -0.41
PNKP-221ENST00000627317 ANK3Q12955 4377 aaKnown RBP12.47□□□□□ -0.41
PNKP-221ENST00000627317 A0A1B0GWJ7 208 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 ZNF850A8MQ14 1090 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 F5H5P2 479 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 H0YL77 283 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 OGG1O15527 345 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 CSF3P09919 207 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 ZNF20P17024 532 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 TNFRSF1AP19438 455 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 MAP2K4P45985 399 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 CHN2P52757 468 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 CDH15P55291 814 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 BDH1Q02338 343 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 SPERTQ8NA61 448 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 OR10AC1Q8NH08 325 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 RPS4Y2Q8TD47 263 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 TSEN15Q8WW01 171 aaKnown RBP12.47□□□□□ -0.41
PNKP-221ENST00000627317 ITLN1Q8WWA0 313 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 MEGF10Q96KG7 1140 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 HIST1H2AAQ96QV6 131 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 MICU1Q9BPX6 476 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 MYOZ1Q9NP98 299 aaPredicted RBP12.47□□□□□ -0.41
PNKP-221ENST00000627317 IL19Q9UHD0 177 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
PNKP-221ENST00000627317 MPC1Q9Y5U8 109 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 SIRT4Q9Y6E7 314 aaPredicted RBP12.47□□□□□ -0.41
PNKP-221ENST00000627317 HIVEP2P31629 2446 aa12.47□□□□□ -0.41
PNKP-221ENST00000627317 TNFAIP8O95379 198 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 HSMCR30P0CW71 290 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 CELP19835 753 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 CD200P41217 278 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 PDLIM4P50479 330 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 DSCR9P59020 149 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 CLVS2Q5SYC1 327 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 PLCXD3Q63HM9 321 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 DMKNQ6E0U4 476 aaPredicted RBP12.46□□□□□ -0.41
PNKP-221ENST00000627317 ZNF773Q6PK81 442 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 Q6ZSR3 168 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 ZNF367Q7RTV3 350 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 C10orf105Q8TEF2 133 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 RDH5Q92781 318 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 RTL8AQ9BWD3 113 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 C14orf119Q9NWQ9 140 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 DHDHQ9UQ10 334 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 ZNF281Q9Y2X9 895 aa12.46□□□□□ -0.41
PNKP-221ENST00000627317 IGHV1-69-2A0A0G2JMI3 117 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 IGHV3-64DA0A0J9YX35 117 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 A6NIN4 97 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 LYNX1G3V0Z9 82 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 LMX1BO60663 402 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 CDC14BO60729 498 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 NRASP01111 189 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 LYNX1P0DP58 116 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 MRPS11P82912 194 aaKnown RBP12.45□□□□□ -0.42
PNKP-221ENST00000627317 ACSM1Q08AH1 577 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 DOC2BQ14184 412 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 KCTD8Q6ZWB6 473 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 MOB3CQ70IA8 216 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 CELF2-AS1Q8N7Q2 184 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 OR51A4Q8NGJ6 313 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 GPR148Q8TDV2 347 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 PP6455Q8WZ26 134 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 GHSRQ92847 366 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 UFD1Q92890 307 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 FGGYQ96C11 551 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 C10orf35Q96D05 121 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 ITPKCQ96DU7 683 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 PPP1R3EQ9H7J1 279 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 ACOT13Q9NPJ3 140 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 GPR173Q9NS66 373 aa12.45□□□□□ -0.42
PNKP-221ENST00000627317 ANKRD61A6NGH8 418 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 VWC2LB2RUY7 222 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 GATBO75879 557 aaKnown RBP12.44□□□□□ -0.42
PNKP-221ENST00000627317 SERPINA3P01011 423 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 SOX2P48431 317 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 HFEQ30201 348 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 SPRNQ5BIV9 151 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 CEP78Q5JTW2 689 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 PRAMEF6Q5VXH4 476 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 SPARTQ8N0X7 666 aa12.44□□□□□ -0.42
PNKP-221ENST00000627317 HPSE2Q8WWQ2 592 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms