RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 DPY19L2P2Q6ZN68 376 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 PRR22Q8IZ63 422 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 TMEM156Q8N614 296 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 OR4N2Q8NGD1 307 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 OR5M8Q8NGP6 311 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 MARCH1Q8TCQ1 289 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 MARC2Q969Z3 335 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 SGTBQ96EQ0 304 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 OR2M2Q96R28 347 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 RASL10BQ96S79 203 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 UBTD1Q9HAC8 227 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 MCCC2Q9HCC0 563 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 OR2S2Q9NQN1 319 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 SLC2A8Q9NY64 477 aa10.23□□□□□ -0.77
LINC00538-201ENST00000626109 A0A0G2JK05 382 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 MED6O75586 246 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 ACKR3P25106 362 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 OR10A3P58181 314 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 COL28A1Q2UY09 1125 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 CD276Q5ZPR3 534 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 OPN5Q6U736 354 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 LINC00114Q6XXX2 140 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF782Q6ZMW2 699 aaPredicted RBP10.22□□□□□ -0.77
LINC00538-201ENST00000626109 SLC35F2Q8IXU6 374 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF440Q8IYI8 595 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 GCNT2Q8N0V5 402 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 OR5J2Q8NH18 312 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 HAVCR2Q8TDQ0 301 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 ST8SIA1Q92185 356 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 MRI1Q9BV20 369 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 METTL9Q9H1A3 318 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 PPIL3Q9H2H8 161 aaKnown RBP10.22□□□□□ -0.77
LINC00538-201ENST00000626109 GALNT9Q9HCQ5 603 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 GCM1Q9NP62 436 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 DNAJB12Q9NXW2 375 aaKnown RBP10.22□□□□□ -0.77
LINC00538-201ENST00000626109 FLRT3Q9NZU0 649 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 ST6GALNAC2Q9UJ37 374 aa10.22□□□□□ -0.77
LINC00538-201ENST00000626109 KLF2Q9Y5W3 355 aaPredicted RBP10.22□□□□□ -0.77
LINC00538-201ENST00000626109 A0A1W2PRG6 482 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 GSTZ1O43708 216 aaPredicted RBP10.21□□□□□ -0.77
LINC00538-201ENST00000626109 TCRBP04435 133 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 UCHL1P09936 223 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 EPXP11678 715 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 RPL4P36578 427 aaKnown RBP10.21□□□□□ -0.77
LINC00538-201ENST00000626109 HERV-K104P63124 156 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 FGFBP1Q14512 234 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 CDK5R1Q15078 307 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF141Q15928 474 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 Q5BKY6 102 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 FAM27D1Q5T7N8 215 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 DND1Q8IYX4 353 aaKnown RBP10.21□□□□□ -0.77
LINC00538-201ENST00000626109 BEST3Q8N1M1 668 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 CADM2Q8N3J6 435 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 FDCSPQ8NFU4 85 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 ZMYND19Q96E35 227 aaPredicted RBP10.21□□□□□ -0.77
LINC00538-201ENST00000626109 SCMH1Q96GD3 660 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 GPR132Q9UNW8 380 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF337Q9Y3M9 751 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 HSPB11Q9Y547 144 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 IER3IP1Q9Y5U9 82 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 ACACAQ13085 2346 aa10.21□□□□□ -0.77
LINC00538-201ENST00000626109 URB1O60287 2271 aaKnown RBP10.21□□□□□ -0.78
LINC00538-201ENST00000626109 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 C7orf66A4D0T2 115 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 SIVA1O15304 175 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 TSPAN2O60636 221 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 CEACAM4O75871 244 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 RRASP10301 218 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 ANXA3P12429 323 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 HIST1H1CP16403 213 aaKnown RBP10.21□□□□□ -0.78
LINC00538-201ENST00000626109 FPR2P25090 351 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 EDNRAP25101 427 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 PRDX2P32119 198 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 GPR12P47775 334 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 MFAP5Q13361 173 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 SLC25A35Q3KQZ1 300 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 SLC36A2Q495M3 483 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 TP53I3Q53FA7 332 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 UBE2NLQ5JXB2 153 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 BCL2L15Q5TBC7 163 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 KCNIP4Q6PIL6 250 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 LYPD4Q6UWN0 246 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 RPTNQ6XPR3 784 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 OR10S1Q8NGN2 331 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 OR4K13Q8NH42 304 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 OR4A16Q8NH70 328 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 C15orf40Q8WUR7 153 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 C22orf15Q8WYQ4 148 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 MCHR2Q969V1 340 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 ORAI1Q96D31 301 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 ARSGQ96EG1 525 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 SLC19A3Q9BZV2 496 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 GNG8Q9UK08 70 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 PITPNC1Q9UKF7 332 aa10.21□□□□□ -0.78
LINC00538-201ENST00000626109 TRAV26-1A0A087WT03 109 aa10.2□□□□□ -0.78
LINC00538-201ENST00000626109 A0A087WUJ7 227 aa10.2□□□□□ -0.78
LINC00538-201ENST00000626109 ZNF354AO60765 605 aaPredicted RBP10.2□□□□□ -0.78
LINC00538-201ENST00000626109 FCGR3BO75015 233 aa10.2□□□□□ -0.78
LINC00538-201ENST00000626109 OR6A2O95222 327 aa10.2□□□□□ -0.78
LINC00538-201ENST00000626109 ITGB2P05107 769 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms