RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 DTX1Q86Y01 620 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 PNLDC1Q8NA58 520 aaKnown RBP9.91□□□□□ -0.82
VARS2-213ENST00000625423 CSNK2A3Q8NEV1 391 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 SLC30A7Q8NEW0 376 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 CDC6Q99741 560 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 RAB18Q9NP72 206 aa9.91□□□□□ -0.82
VARS2-213ENST00000625423 STMND1H3BQB6 276 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 BLVRBP30043 206 aaPredicted RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 PTGFRP43088 359 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 CCL7P80098 99 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 RSPO4Q2I0M5 234 aaPredicted RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 ZNF385CQ66K41 422 aaPredicted RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 PEG10Q86TG7 708 aaKnown RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 CLRN3Q8NCR9 226 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 WNT2BQ93097 391 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 OR10C1Q96KK4 312 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 TSNAXQ99598 290 aaKnown RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 METTL8Q9H825 291 aaKnown RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 ZNF160Q9HCG1 818 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 EHFQ9NZC4 300 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 ABCD4O14678 606 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 ACTL6AO96019 429 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 SERPINA2P20848 420 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 ECH1Q13011 328 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 PHYHD1Q5SRE7 291 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 LHFPL1Q86WI0 220 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 FAM89BQ8N5H3 189 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 SLC25A43Q8WUT9 341 aaPredicted RBP9.9□□□□□ -0.82
VARS2-213ENST00000625423 SLC6A15Q9H2J7 730 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 HDGFL3Q9Y3E1 203 aa9.9□□□□□ -0.82
VARS2-213ENST00000625423 OR5H15A6NDH6 313 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 TLX3O43711 291 aaPredicted RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 ADCYAP1P18509 176 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 CBX5P45973 191 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 TMEM200AQ86VY9 491 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 LRRC18Q8N456 261 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 DEFB123Q8N688 67 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 FADS6Q8N9I5 356 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 OR51F2Q8NH61 342 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 SCGB3A2Q96PL1 93 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 OSGIN2Q9Y236 505 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 EP300Q09472 2414 aaPredicted RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 ADAMTS9Q9P2N4 1935 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 IGHV3-15A0A0B4J1V0 119 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 IGHV5-10-1A0A0J9YXX1 117 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 HPNP05981 417 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 PRF1P14222 555 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 FAHP16930 419 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 PTPRZ1P23471 2315 aaPredicted RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 GUCA1AP43080 201 aaPredicted RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 SLC35A1P78382 337 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 NAAAQ02083 359 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 RAB32Q13637 225 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 UBE2V2Q15819 145 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 FAM189A2Q15884 450 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 GUCA2BQ16661 112 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 PLEKHN1Q494U1 663 aaPredicted RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 ZNF585AQ6P3V2 769 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 PRSS54Q6PEW0 395 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 DRAM2Q6UX65 266 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 PUSL1Q8N0Z8 303 aaKnown RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 RNF141Q8WVD5 230 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 ADAT1Q9BUB4 502 aaKnown RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 PECRQ9BY49 303 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 ELL3Q9HB65 397 aaPredicted RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 OR2S2Q9NQN1 319 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 PCDHB16Q9NRJ7 776 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 TMEM100Q9NV29 134 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 GSKIPQ9P0R6 139 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 CHCHD2Q9Y6H1 151 aaPredicted RBP9.89□□□□□ -0.83
VARS2-213ENST00000625423 DKK1O94907 266 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 CELA2AP08217 269 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 HOXB5P09067 269 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 CD79AP11912 226 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 FCGR2AP12318 317 aa9.89□□□□□ -0.83
VARS2-213ENST00000625423 FOXI3A8MTJ6 420 aaPredicted RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 GDF9O60383 454 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 KNG1P01042 644 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 MSR1P21757 451 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 EIF1P41567 113 aaKnown RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 CSNK1A1P48729 337 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 PABPC1L2AQ5JQF8 200 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 TMEM88Q6PEY1 159 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 GALNTL5Q7Z4T8 443 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 PIGTQ969N2 578 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 CCDC74BQ96LY2 380 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 ZNF385AQ96PM9 386 aaKnown RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 SLC26A1Q9H2B4 701 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 C19orf25Q9UFG5 118 aaPredicted RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 FAM157CP0CG43 387 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 NAT2P11245 290 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 RPS2P15880 293 aaKnown RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 ADH6P28332 368 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 S100A10P60903 97 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 LSM6P62312 80 aaKnown RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 ENDOGQ14249 297 aaKnown RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 ZNF239Q16600 458 aaKnown RBP9.88□□□□□ -0.83
VARS2-213ENST00000625423 PPP1R3BQ86XI6 285 aa9.88□□□□□ -0.83
VARS2-213ENST00000625423 GJC3Q8NFK1 279 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms