RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 C6orf99Q4VX62 202 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 TEX30Q5JUR7 227 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 TMEM236Q5W0B7 351 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 KDM4DQ6B0I6 523 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 GUSBP11Q6P575 273 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 PID1Q7Z2X4 250 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 DRAM1Q8N682 238 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 OR51A7Q8NH64 312 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 DCAKDQ8WVC6 231 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 SMARCD1Q96GM5 515 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 OR10C1Q96KK4 312 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 C18orf15Q96N68 181 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 RNF157Q96PX1 679 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 SPIN2AQ99865 258 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 GABRG3Q99928 467 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 SPIN2BQ9BPZ2 258 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 HEBP1Q9NRV9 189 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 VAX2Q9UIW0 290 aa2.91□□□□□ -1.94
CPNE3-213ENST00000622183 TMEM94Q12767 1356 aa2.9□□□□□ -1.94
CPNE3-213ENST00000622183 CENPVL3A0A0U1RRI6 287 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 H7C2Y5 167 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 MANBAO00462 879 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 PRMT5O14744 637 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-213ENST00000622183 MYL12BO14950 172 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 POLR1CO15160 346 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-213ENST00000622183 GATCO43716 136 aaKnown RBP2.9□□□□□ -1.95
CPNE3-213ENST00000622183 VAPBO95292 243 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 PRB2P02812 416 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-213ENST00000622183 IL1RNP18510 177 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 ERFP50548 548 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 ATP5J2P56134 94 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 MLF1P58340 268 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 RPL31P62899 125 aaKnown RBP2.9□□□□□ -1.95
CPNE3-213ENST00000622183 INCA1Q0VD86 236 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 EIF4EBP2Q13542 120 aaPredicted RBP2.9□□□□□ -1.95
CPNE3-213ENST00000622183 SLC25A35Q3KQZ1 300 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 YIF1BQ5BJH7 314 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 C6orf183Q5T699 404 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 MFSD14CQ5VZR4 134 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 DUPD1Q68J44 220 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 SHISA6Q6ZSJ9 500 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 NECAP1Q8NC96 275 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 OR9A2Q8NGT5 310 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 OR1S1Q8NH92 325 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 OR1L1Q8NH94 360 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 MSANTD3Q96H12 275 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 CFAP53Q96M91 514 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 DOK1Q99704 481 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 ENOPH1Q9UHY7 261 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 NDRG2Q9UN36 371 aaKnown RBP2.9□□□□□ -1.95
CPNE3-213ENST00000622183 CFL2Q9Y281 166 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 V9GYY9 64 aa2.9□□□□□ -1.95
CPNE3-213ENST00000622183 SLIT3O75094 1523 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ARID1AO14497 2285 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 IGHV3-49A0A0A0MS15 119 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ANKRD20A5PA0PJZ0 165 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 LRCOL1A6NCL2 159 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 E7EWF7 191 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 M0R1X1 148 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 PLIN3O60664 434 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ALOX12BO75342 701 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 MPZL1O95297 269 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 RHOCP08134 193 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 HTR2CP28335 458 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF816Q0VGE8 651 aaPredicted RBP2.89□□□□□ -1.95
CPNE3-213ENST00000622183 COX19Q49B96 90 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ZNF880Q6PDB4 577 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 Q6ZSR6 202 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ERO1BQ86YB8 467 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 H1FOOQ8IZA3 346 aaPredicted RBP2.89□□□□□ -1.95
CPNE3-213ENST00000622183 SLC7A5P1Q8MH63 180 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ZFAND1Q8TCF1 268 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 CDX2Q99626 313 aaPredicted RBP2.89□□□□□ -1.95
CPNE3-213ENST00000622183 CHCHD7Q9BUK0 85 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 PLEKHF2Q9H8W4 249 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 ANKHQ9HCJ1 492 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 CYTL1Q9NRR1 136 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 STK38LQ9Y2H1 464 aa2.89□□□□□ -1.95
CPNE3-213ENST00000622183 TRAV8-4A0A0B4J246 113 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 C7orf66A4D0T2 115 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 TMEM150BA6NC51 233 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 ERICH4A6NGS2 130 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 SEC14L6B5MCN3 397 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 PSMD11O00231 422 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 GATBO75879 557 aaKnown RBP2.88□□□□□ -1.95
CPNE3-213ENST00000622183 IGLV2-8P01709 118 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 P01737 135 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 HLA-DQB1P01920 261 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 OR5AL1P0C617 328 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 HSPD1P10809 573 aaKnown RBP2.88□□□□□ -1.95
CPNE3-213ENST00000622183 ARR3P36575 388 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 PRLHRP49683 370 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 MTPNP58546 118 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 TMED1Q13445 227 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 PIGHQ14442 188 aaPredicted RBP2.88□□□□□ -1.95
CPNE3-213ENST00000622183 TAL2Q16559 108 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 NDUFAF6Q330K2 333 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 SYS1Q8N2H4 156 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 OR5T1Q8NG75 326 aa2.88□□□□□ -1.95
CPNE3-213ENST00000622183 OR6N2Q8NGY6 317 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms