RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 LDB3O75112 727 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF880Q6PDB4 577 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 LMO3Q8TAP4 145 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 LRRC15Q8TF66 581 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 A0A0B4J293 547 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 NPWQ8N729 165 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 GJC3Q8NFK1 279 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 SGK494Q96LW2 274 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 RAB33BQ9H082 229 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 TREM2Q9NZC2 230 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 C9orf170A2RU37 121 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 OR2T8A6NH00 312 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 GGTA1PQ4G0N0 100 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 NKAIN1Q4KMZ8 207 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 PRAMEF20Q5VT98 475 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 DOK3Q7L591 496 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 OR52N4Q8NGI2 321 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 SPACA9Q96E40 222 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-208ENST00000618395 RAB40CQ96S21 281 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 RNF2Q99496 336 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 P4HTMQ9NXG6 502 aa13.64□□□□□ -0.23
COL5A1-208ENST00000618395 H3BP45 60 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 MASP2O00187 686 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 JAG1P78504 1218 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 STAC2Q6ZMT1 411 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 OR1N2Q8NGR9 330 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 OR1P1Q8NH06 330 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 OR2T6Q8NHC8 308 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF480Q8WV37 535 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF506Q5JVG8 444 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 RANBP10Q6VN20 620 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 LINC00346Q8IVM7 164 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 ARRDC5A6NEK1 342 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 SNURFLB1AK76 121 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 CTNSO60931 367 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 GABRA1P14867 456 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 CLDN16Q9Y5I7 305 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 CEP290O15078 2479 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-208ENST00000618395 FPR2P25090 351 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 SSX8Q7RTT4 187 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 TAAR6Q96RI8 345 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 NAA60Q9H7X0 242 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 FIGNL2A6NMB9 653 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 PELI3Q8N2H9 469 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 ISG20Q96AZ6 181 aaKnown RBP13.63□□□□□ -0.23
COL5A1-208ENST00000618395 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 KCNAB3O43448 404 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 TIMM8AO60220 97 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-208ENST00000618395 VAMP5O95183 116 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 GALP22466 123 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 PLPPR5Q32ZL2 321 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 GDF6Q6KF10 455 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-208ENST00000618395 CALHM1Q8IU99 346 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 ATOH8Q96SQ7 321 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 SIGMAR1Q99720 223 aa13.63□□□□□ -0.23
COL5A1-208ENST00000618395 CSN3P07498 182 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 CD68P34810 354 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 PPIAP62937 165 aaKnown RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 SURF2Q15527 256 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 LPAR4Q99677 370 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 HIST1H1TP22492 207 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 FGF8P55075 233 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 WNT3P56703 355 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 COX20Q5RI15 118 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 SIRT6Q8N6T7 355 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 HIST1H4GQ99525 98 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 HSFX1Q9UBD0 423 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 SLC45A2Q9UMX9 530 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 CDX1P47902 265 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 SLC25A34Q6PIV7 304 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 OR2Y1Q8NGV0 311 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 NXPE3Q969Y0 559 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 NCOR1P1Q9H4R4 102 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 MARCH5Q9NX47 278 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 WIPI2Q9Y4P8 454 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF195O14628 629 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 DUX1O43812 170 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 RELQ04864 619 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 IL13RA2Q14627 380 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 EMC4Q5J8M3 183 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 CLEC18BQ6UXF7 455 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 TEX29Q8N6K0 151 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 PIGTQ969N2 578 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 IGHA1P01876 353 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 RHOBP62745 196 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 NR0B2Q15466 257 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 FAM110CQ1W6H9 321 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 FIGLAQ6QHK4 219 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 FBXL17Q9UF56 701 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 ZBTB42B2RXF5 422 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 C11orf94C9JXX5 98 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 PLA1AQ53H76 456 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 RHBDD2Q6NTF9 364 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 TMEM184BQ9Y519 407 aaPredicted RBP13.62□□□□□ -0.23
COL5A1-208ENST00000618395 CPMP14384 443 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 FLT3LGP49771 235 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 ZNF511Q8NB15 262 aa13.62□□□□□ -0.23
COL5A1-208ENST00000618395 OR11L1Q8NGX0 322 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms