RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 OR5P3Q8WZ94 311 aa20.92■□□□□ 0.94
VEGFA-228ENST00000617771 DUS3LQ96G46 650 aaKnown RBP20.92■□□□□ 0.94
VEGFA-228ENST00000617771 HIST1H2AAQ96QV6 131 aa20.92■□□□□ 0.94
VEGFA-228ENST00000617771 PKP2Q99959 881 aa20.92■□□□□ 0.94
VEGFA-228ENST00000617771 GABARAPL1Q9H0R8 117 aa20.92■□□□□ 0.94
VEGFA-228ENST00000617771 RASSF4Q9H2L5 321 aa20.92■□□□□ 0.94
VEGFA-228ENST00000617771 FAM206AQ9NX38 181 aa20.92■□□□□ 0.94
VEGFA-228ENST00000617771 SLC22A31A6NKX4 558 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 ZAR1LA6NP61 321 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 SRRM5B3KS81 715 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 ZNF879B4DU55 563 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 P2RY10O00398 339 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 DVL1O14640 695 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 ECDO95905 644 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-228ENST00000617771 MAP2K3P46734 347 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 RIDAP52758 137 aaKnown RBP20.91■□□□□ 0.94
VEGFA-228ENST00000617771 ROM1Q03395 351 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 ZNF829Q3KNS6 432 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-228ENST00000617771 SLC36A1Q7Z2H8 476 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 TCEANCQ8N8B7 351 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 OR10Z1Q8NGY1 313 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 C12orf43Q96C57 262 aaKnown RBP20.91■□□□□ 0.94
VEGFA-228ENST00000617771 RNF170Q96K19 258 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 DUX5Q96PT3 197 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 OR8B4Q96RC9 309 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 PCGF1Q9BSM1 259 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 IKZF2Q9UKS7 526 aa20.91■□□□□ 0.94
VEGFA-228ENST00000617771 ZNF816-ZNF321PA0A0X1KG74 233 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 NXNL2Q5VZ03 156 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 C12orf73Q69YU5 71 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 BTN2A1Q7KYR7 527 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 AMIGO2Q86SJ2 522 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 COMMD2Q86X83 199 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 TMEM163Q8TC26 289 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 ST8SIA4Q92187 359 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 SLC25A28Q96A46 364 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 MNTQ99583 582 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 PBOV1Q9GZY1 135 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 COPS3Q9UNS2 423 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 DOCK11Q5JSL3 2073 aa20.9■□□□□ 0.94
VEGFA-228ENST00000617771 CIB2O75838 187 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 TOX4O94842 621 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 ATP6V1B1P15313 513 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 ACTR3P61158 418 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 WDR38Q5JTN6 314 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 AADACL4Q5VUY2 407 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 METTL11BQ5VVY1 283 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 BCDIN3DQ7Z5W3 292 aaKnown RBP20.89■□□□□ 0.93
VEGFA-228ENST00000617771 GID4Q8IVV7 300 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 HPSE2Q8WWQ2 592 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 LRTOMTQ8WZ04 291 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 RPL3LQ92901 407 aaKnown RBP20.89■□□□□ 0.93
VEGFA-228ENST00000617771 C1orf147Q96MC9 270 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-228ENST00000617771 CCL13Q99616 98 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 TTTY10Q9BZA0 68 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 DNAJB11Q9UBS4 358 aa20.89■□□□□ 0.93
VEGFA-228ENST00000617771 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.88■□□□□ 0.93
VEGFA-228ENST00000617771 CLDN34H7C241 214 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 M0R129 80 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 RNASE1P07998 156 aaKnown RBP20.88■□□□□ 0.93
VEGFA-228ENST00000617771 HKR1P10072 659 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 EPHA2P29317 976 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 EFNB1P98172 346 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 AWAT1Q58HT5 328 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 FAM76BQ5HYJ3 339 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 BRD3OSQ6XYD6 125 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 THAP5Q7Z6K1 395 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 SCCPDHQ8NBX0 429 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 WDFY2Q96P53 400 aa20.88■□□□□ 0.93
VEGFA-228ENST00000617771 NUFIP1Q9UHK0 495 aaKnown RBP20.88■□□□□ 0.93
VEGFA-228ENST00000617771 PRR32B1ATL7 298 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 SFTPBP07988 381 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 MMP9P14780 707 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 CXCR4P61073 352 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 RIPPLY1Q0D2K3 151 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 FOXL1Q12952 345 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 ZNF322Q6U7Q0 402 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-228ENST00000617771 KRT74Q7RTS7 529 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 SLC35F2Q8IXU6 374 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 OR51E1Q8TCB6 317 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 FAM71F1Q96KD3 344 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-228ENST00000617771 IL4I1Q96RQ9 567 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 MOB1AQ9H8S9 216 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 HAO2Q9NYQ3 351 aa20.87■□□□□ 0.93
VEGFA-228ENST00000617771 SOX21Q9Y651 276 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-228ENST00000617771 ZNF670-ZNF695F2Z2N8 137 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 GPR37O15354 613 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 NDUFB3O43676 98 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 FCN3O75636 299 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 GPM6AP51674 278 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 GMFBP60983 142 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 GNG3P63215 75 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 PDCD1Q15116 288 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 SLC9A3R2Q15599 337 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 CEACAM21Q3KPI0 293 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 ZBTB37Q5TC79 503 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 STUMQ69YW2 141 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 ZDHHC16Q969W1 377 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 SEH1LQ96EE3 360 aa20.86■□□□□ 0.93
VEGFA-228ENST00000617771 RAB3IPQ96QF0 476 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms