RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 TSEN15Q8WW01 171 aaKnown RBP12.63□□□□□ -0.39
UBXN1-218ENST00000616865 HPS1Q92902 700 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 SPSB4Q96A44 273 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 HAVCR1Q96D42 359 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 SMIM19Q96E16 107 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 C1orf159Q96HA4 380 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 MRPS26Q9BYN8 205 aaKnown RBP12.63□□□□□ -0.39
UBXN1-218ENST00000616865 MRPL37Q9BZE1 423 aaKnown RBP12.63□□□□□ -0.39
UBXN1-218ENST00000616865 PLEKHA1Q9HB21 404 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 DYNLRB1Q9NP97 96 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 TAAR3PQ9P1P4 343 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 PURGQ9UJV8 347 aaKnown RBP12.63□□□□□ -0.39
UBXN1-218ENST00000616865 HHLA2Q9UM44 414 aa12.63□□□□□ -0.39
UBXN1-218ENST00000616865 OR4C45A6NMZ5 311 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 LILRA1O75019 489 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 CLPTM1O96005 669 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 PCMT1P22061 227 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 ACHEP22303 614 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 DDOSTP39656 456 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 PRSS12P56730 875 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 PSG7Q13046 419 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 TSTQ16762 297 aaKnown RBP12.62□□□□□ -0.39
UBXN1-218ENST00000616865 UBE2UQ5VVX9 321 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 DMKNQ6E0U4 476 aaPredicted RBP12.62□□□□□ -0.39
UBXN1-218ENST00000616865 LRP11Q86VZ4 500 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 RDH10Q8IZV5 341 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 FTMTQ8N4E7 242 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 LINC01356Q8N9X3 169 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 BHLHE23Q8NDY6 225 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 CCDC54Q8NEL0 328 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 CSNK2A3Q8NEV1 391 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 OR13C3Q8NGS6 347 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 NEU4Q8WWR8 484 aaPredicted RBP12.62□□□□□ -0.39
UBXN1-218ENST00000616865 RNF166Q96A37 237 aaPredicted RBP12.62□□□□□ -0.39
UBXN1-218ENST00000616865 LYZL4Q96KX0 146 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 PDCD1LG2Q9BQ51 273 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 ZNF281Q9Y2X9 895 aa12.62□□□□□ -0.39
UBXN1-218ENST00000616865 SIRT4Q9Y6E7 314 aaPredicted RBP12.62□□□□□ -0.39
UBXN1-218ENST00000616865 hCG_38984A0A1B0GV85 526 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ANKRD30BLA7E2S9 258 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 CD300LBA8K4G0 201 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 DHRS3O75911 302 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ZFPL1O95159 310 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 IGHV3-13P01766 116 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ISG15P05161 165 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ERCC1P07992 297 aaPredicted RBP12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ZNF20P17024 532 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 KITLGP21583 273 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ANOS1P23352 680 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 SRP14P37108 136 aaKnown RBP12.61□□□□□ -0.39
UBXN1-218ENST00000616865 GNALP38405 381 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 EVX1P49640 407 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 FAM3AP98173 230 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 RIPPLY1Q0D2K3 151 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ALKBH6Q3KRA9 238 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ZMAT1Q5H9K5 638 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 LIPKQ5VXJ0 399 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 SEMA6DQ8NFY4 1073 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 OR56B2PQ8NGI1 322 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 GPR148Q8TDV2 347 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 GHSRQ92847 366 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 ITFG2Q969R8 447 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 OPALINQ96PE5 141 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 TMED9Q9BVK6 235 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 CYSLTR2Q9NS75 346 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 DHDHQ9UQ10 334 aa12.61□□□□□ -0.39
UBXN1-218ENST00000616865 A0A1B0GTI1 187 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 IQCF6A8MYZ5 107 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 M0R233 179 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 PLPP2O43688 288 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 INMTO95050 263 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 CPEP16870 476 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 LIPAP38571 399 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 GPR50Q13585 617 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 MSMPQ1L6U9 139 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 ZCCHC24Q8N2G6 241 aaKnown RBP12.6□□□□□ -0.39
UBXN1-218ENST00000616865 MS4A15Q8N5U1 240 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 CGGBP1Q9UFW8 167 aaPredicted RBP12.6□□□□□ -0.39
UBXN1-218ENST00000616865 SCOCQ9UIL1 159 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 PIGLQ9Y2B2 252 aa12.6□□□□□ -0.39
UBXN1-218ENST00000616865 NOP16Q9Y3C1 178 aaKnown RBP12.6□□□□□ -0.39
UBXN1-218ENST00000616865 IGLV3-9A0A075B6K5 115 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 SERPINA3P01011 423 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 CD1AP06126 327 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 CD2P06729 351 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 CCL1P22362 96 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 ALDH3B1P43353 468 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 SOX2P48431 317 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 TPBGQ13641 420 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 RIN1Q13671 783 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 OR8B8Q15620 311 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 TRAM1Q15629 374 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 YIF1BQ5BJH7 314 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.59□□□□□ -0.39
UBXN1-218ENST00000616865 OR8G5Q8NG78 346 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 RPS4Y2Q8TD47 263 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 MUL1Q969V5 352 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 PAPOLGQ9BWT3 736 aaKnown RBP12.59□□□□□ -0.39
UBXN1-218ENST00000616865 TMEM100Q9NV29 134 aa12.59□□□□□ -0.39
UBXN1-218ENST00000616865 MYEF2Q9P2K5 600 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms