RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 PLPP7Q8NBV4 271 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 OR2AE1Q8NHA4 323 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 SPRYD4Q8WW59 207 aaPredicted RBP15.76■□□□□ 0.11
CDX1-202ENST00000616154 AMELYQ99218 206 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 OR51V1Q9H2C8 321 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 MMP24Q9Y5R2 645 aa15.76■□□□□ 0.11
CDX1-202ENST00000616154 GMDSO60547 372 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 FAM20BO75063 409 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 DDOSTP39656 456 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 PSMB10P40306 273 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 BPIFB3P59826 476 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 TAF13Q15543 124 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 MEDAGQ5VYS4 303 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 TREML4Q6UXN2 200 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 SPATC1Q76KD6 591 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 OR52H1Q8NGJ2 320 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 TAF15Q92804 592 aaKnown RBP eCLIP15.75■□□□□ 0.11
CDX1-202ENST00000616154 TMIGD2Q96BF3 282 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 SP140LQ9H930 580 aa15.75■□□□□ 0.11
CDX1-202ENST00000616154 SRRM5B3KS81 715 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 C22orf46C9J442 243 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 HOXA3O43365 443 aaPredicted RBP15.74■□□□□ 0.11
CDX1-202ENST00000616154 ENSAO43768 121 aaKnown RBP15.74■□□□□ 0.11
CDX1-202ENST00000616154 SLC2A1P11166 492 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 MDKP21741 143 aaPredicted RBP15.74■□□□□ 0.11
CDX1-202ENST00000616154 CX3CR1P49238 355 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 NPY4RP50391 375 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 FGF12P61328 243 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 IL5RAQ01344 420 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 DEFB112Q30KQ8 113 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 GPR157Q5UAW9 335 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 PRAMEF6Q5VXH4 476 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 BRD3OSQ6XYD6 125 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 BBS1Q8NFJ9 593 aa15.74■□□□□ 0.11
CDX1-202ENST00000616154 CCDC182A6NF36 153 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 SELENOFO60613 162 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 LYNP07948 512 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 ALOX5APP20292 161 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 CA6P23280 308 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 CFL1P23528 166 aaKnown RBP15.73■□□□□ 0.11
CDX1-202ENST00000616154 CXCR4P61073 352 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 FAM3AP98173 230 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 TMED1Q13445 227 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 OR8G1Q15617 311 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 MPPED2Q15777 294 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 GID4Q8IVV7 300 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 SPERTQ8NA61 448 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 C19orf18Q8NEA5 215 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 OR56B2PQ8NGI1 322 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 ZDHHC16Q969W1 377 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 OTULINQ96BN8 352 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 ADAT1Q9BUB4 502 aaKnown RBP15.73■□□□□ 0.11
CDX1-202ENST00000616154 RGCCQ9H4X1 137 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 NIPAL2Q9H841 368 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 UFSP2Q9NUQ7 469 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 HAO2Q9NYQ3 351 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 RNF7Q9UBF6 113 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 AASSQ9UDR5 926 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 PCDHGB5Q9Y5G0 923 aa15.73■□□□□ 0.11
CDX1-202ENST00000616154 hCG_38984A0A1B0GV85 526 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 GGT3PA6NGU5 568 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 ENTPD6O75354 484 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 HSD11B1P28845 292 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 ZNF121P58317 390 aaPredicted RBP15.72■□□□□ 0.11
CDX1-202ENST00000616154 MED21Q13503 144 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 KCNJ8Q15842 424 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 KLHL12Q53G59 568 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 SLC16A9Q7RTY1 509 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 BCDIN3DQ7Z5W3 292 aaKnown RBP15.72■□□□□ 0.11
CDX1-202ENST00000616154 CNIH3Q8TBE1 160 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 SGK3Q96BR1 496 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 CNBD2Q96M20 576 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 Q96MT0 163 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 YIPF3Q9GZM5 350 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 FN3KRPQ9HA64 309 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 NOX4Q9NPH5 578 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 PLCXD1Q9NUJ7 323 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 MRPS18AQ9NVS2 196 aaKnown RBP15.72■□□□□ 0.11
CDX1-202ENST00000616154 DNAJC27Q9NZQ0 273 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 ZNF319Q9P2F9 582 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 CTSZQ9UBR2 303 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 KLHDC2Q9Y2U9 406 aa15.72■□□□□ 0.11
CDX1-202ENST00000616154 A0A1B0GUS0 222 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 LGALS8O00214 317 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 P2RY10O00398 339 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 OMGP23515 440 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 HTR1FP30939 366 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 CFHR2P36980 270 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 PSMA6P60900 246 aaKnown RBP15.71■□□□□ 0.11
CDX1-202ENST00000616154 OR8B8Q15620 311 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 C6orf141Q5SZD1 244 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 CD276Q5ZPR3 534 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 DEGS2Q6QHC5 323 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 Q6YL49 198 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 MEPCEQ7L2J0 689 aaKnown RBP15.71■□□□□ 0.11
CDX1-202ENST00000616154 RFKQ969G6 155 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 TECTBQ96PL2 329 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 TEAD3Q99594 435 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 CLN6Q9NWW5 311 aa15.71■□□□□ 0.11
CDX1-202ENST00000616154 ERVK-18Q9QC07 812 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms