RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 ABHD16AO95870 558 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 PNPP00491 289 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 AMBPP02760 352 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 RAB11AP62491 216 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 HERPUD1Q15011 391 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZNF260Q3ZCT1 412 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 C5orf24Q7Z6I8 188 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 RTN4RL2Q86UN3 420 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 OR2G3Q8NGZ4 309 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 POC1BQ8TC44 478 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 RNF166Q96A37 237 aaPredicted RBP9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 DOCK9Q9BZ29 2069 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 GAPDHP04406 335 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 RPL23AP62750 156 aaKnown RBP9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 CCL20P78556 96 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 TRA2AQ13595 282 aaKnown RBP eCLIP9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 TMEM31Q5JXX7 168 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 VITQ6UXI7 678 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 CDC20BQ86Y33 519 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 POC1AQ8NBT0 407 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 OR2A1Q8NGT9 310 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 ASB5Q8WWX0 329 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 TMEM37Q8WXS4 190 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 GPR173Q9NS66 373 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 DENND4CQ5VZ89 1909 aa9.23□□□□□ -0.93
TNFAIP3-208ENST00000615468 CCDC85CA6NKD9 419 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 SLC33A1O00400 549 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 OR4A8P0C604 315 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 IGFBP4P22692 258 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 CXCR1P25024 350 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 POLR2HP52434 150 aaKnown RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 SLC17A1Q14916 467 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 BTNL3Q6UXE8 466 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZNF248Q8NDW4 579 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 STACQ99469 402 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 GPER1Q99527 375 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 BANF2Q9H503 90 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 GPR132Q9UNW8 380 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 STRAPQ9Y3F4 350 aaKnown RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 IGKV1-8A0A0C4DH67 115 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 TLCD2A6NGC4 264 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 DHRS7CA6NNS2 312 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 SIAH2O43255 324 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 SEC11BP0C7V7 166 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 MMP9P14780 707 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 AKT2P31751 481 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 TDGF1P3P51864 188 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 RND3P61587 244 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 FHL1Q13642 323 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZNF77Q15935 545 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 DMRTC1Q5HYR2 192 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 SLC18B1Q6NT16 456 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 KCTD18Q6PI47 426 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZNF66Q6ZN08 573 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 OR4N2Q8NGD1 307 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 TMEM230Q96A57 120 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 FGGYQ96C11 551 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 R3HDM4Q96D70 268 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 RPP25Q9BUL9 199 aaKnown RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 CNTD2Q9H8S5 307 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZNF701Q9NV72 531 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 C1orf123Q9NWV4 160 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 LRFN1Q9P244 771 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 SUSD2Q9UGT4 822 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZNF107Q9UII5 783 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 A0A1W2PPV9 198 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 P2RY10O00398 339 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 RAB28P51157 221 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 CDK3Q00526 305 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 GLO1Q04760 184 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 ZP2Q05996 745 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 MFGE8Q08431 387 aaPredicted RBP9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 NEK7Q8TDX7 302 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 AQP3Q92482 292 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 NMNAT2Q9BZQ4 307 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 WNT5BQ9H1J7 359 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 AK3Q9UIJ7 227 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 RFNGQ9Y644 331 aa9.22□□□□□ -0.93
TNFAIP3-208ENST00000615468 CCDC187A0A096LP49 1063 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 CCDC163A0A0D9SF12 145 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 LMX1BO60663 402 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 LINC00271P0C7V0 271 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 EGR3Q06889 387 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 IQCJQ1A5X6 159 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 DNLZQ5SXM8 178 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 PHF19Q5T6S3 580 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 AADACL3Q5VUY0 350 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 TMEM183AQ8IXX5 376 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 OR13D1Q8NGV5 346 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 RPS4Y2Q8TD47 263 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 NICN1Q9BSH3 213 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 FBRSQ9HAH7 460 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 DKKL1Q9UK85 242 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 V9GYS6 101 aa9.21□□□□□ -0.93
TNFAIP3-208ENST00000615468 A0A087WUJ7 227 aa9.21□□□□□ -0.94
TNFAIP3-208ENST00000615468 LOC107986453A0A1B0GWG9 222 aa9.21□□□□□ -0.94
TNFAIP3-208ENST00000615468 CLDN34H7C241 214 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms