RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 PPP1R3CQ9UQK1 317 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 K7ESF4 209 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 SYT6Q5T7P8 510 aaPredicted RBP8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 OLIG3Q7RTU3 272 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 SLC25A42Q86VD7 318 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 TMEM251Q8N6I4 163 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 NPAP1Q9NZP6 1156 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 ARID2Q68CP9 1835 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 GMDSO60547 372 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 CA11O75493 328 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 CDAP32320 146 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 KIAA0040Q15053 153 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 OR2T2Q6IF00 324 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 ZNF774Q6NX45 483 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 LINC00299Q6ZSB3 139 aa8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 MRPS18CQ9Y3D5 142 aaKnown RBP8.66□□□□□ -1.02
TNFRSF9-204ENST00000615230 MEIS3P1A6NDR6 274 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 GPR37O15354 613 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 MT-ND4P03905 459 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 FAM87AP0C7U9 286 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 SLC35B1P78383 322 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 SHEQ5VZ18 495 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 OR2G2Q8NGZ5 317 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 ZNF519Q8TB69 540 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 PTDSS2Q9BVG9 487 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 ACKR4Q9NPB9 350 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 PCDHGA9Q9Y5G4 932 aaKnown RBP8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 ZNF638Q14966 1978 aaKnown RBP8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 OOEPA6NGQ2 149 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 LGALS8O00214 317 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 IGF2P01344 180 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 APEX1P27695 318 aaKnown RBP8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 SLC9A3R2Q15599 337 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 ANKRD34AQ69YU3 496 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 ERGIC1Q969X5 290 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 TMEM230Q96A57 120 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 CNTNAP3BQ96NU0 1288 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 RHOFQ9HBH0 211 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 EXOGQ9Y2C4 368 aaKnown RBP8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 LOC101059948A0A1B0GTJ6 334 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 XKRY2A2RUG3 117 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 NGFP01138 241 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 PSMB1P20618 241 aaKnown RBP8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 WNT3P56703 355 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 RTP5Q14D33 572 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 HMGN3Q15651 99 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 SPATA46Q5T0L3 261 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 CCBE1Q6UXH8 406 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 SH2D5Q6ZV89 423 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 CDH26Q8IXH8 852 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 RDH5Q92781 318 aa8.65□□□□□ -1.02
TNFRSF9-204ENST00000615230 EML2O95834 649 aa8.65□□□□□ -1.03
TNFRSF9-204ENST00000615230 MGMTP16455 207 aa8.65□□□□□ -1.03
TNFRSF9-204ENST00000615230 CA6P23280 308 aa8.65□□□□□ -1.03
TNFRSF9-204ENST00000615230 FAM57AQ8TBR7 257 aa8.65□□□□□ -1.03
TNFRSF9-204ENST00000615230 FAM212BQ9NTI7 297 aaPredicted RBP8.65□□□□□ -1.03
TNFRSF9-204ENST00000615230 TMEM74BQ9NUR3 256 aa8.65□□□□□ -1.03
TNFRSF9-204ENST00000615230 SHISA8B8ZZ34 492 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 HOXB5P09067 269 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 CALCRP30988 508 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 LGALS7P47929 136 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 PLPPR5Q32ZL2 321 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 ATP5SQ99766 215 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 FOXJ2Q9P0K8 574 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 MIOXQ9UGB7 285 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 MLXQ9UH92 298 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 HSPB11Q9Y547 144 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 MRPS18BQ9Y676 258 aaKnown RBP8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 KCNE3Q9Y6H6 103 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 TTC3P53804 2025 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 A0A1W2PN81 502 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 TAAR5O14804 337 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 BGLAPP02818 100 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 CHRNA7P36544 502 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 OR52N4Q8NGI2 321 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 GON7Q9BXV9 100 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 SF3B6Q9Y3B4 125 aaKnown RBP8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 OR4A8P0C604 315 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 CSF2RBP32927 897 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 UBE2G2P60604 165 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 ARPC5LQ9BPX5 153 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 DOCK5Q9H7D0 1870 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 PPIAL4EA0A075B759 164 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 PPIAL4DF5H284 164 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 PPIAL4FP0DN26 164 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 CBR1P16152 277 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 OMGP23515 440 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 F2RP25116 425 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 CDK5Q00535 292 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 PSG6Q00889 435 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 ZNF468Q5VIY5 522 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 UBE3DQ7Z6J8 389 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 NEU4Q8WWR8 484 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 ZNF2Q9BSG1 426 aaPredicted RBP8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 BANF2Q9H503 90 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 RASL12Q9NYN1 266 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 PPIAL4AQ9Y536 164 aa8.64□□□□□ -1.03
TNFRSF9-204ENST00000615230 A0A1W2PQM1 296 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms