RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 TBC1D28Q2M2D7 210 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 CLVS2Q5SYC1 327 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 ZBTB37Q5TC79 503 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 TMEM42Q69YG0 159 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 GDPD3Q7L5L3 318 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 ANGPTL5Q86XS5 388 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 DOLPP1Q86YN1 238 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 WFDC8Q8IUA0 241 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 IZUMO1Q8IYV9 350 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 C17orf78Q8N4C9 275 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 RPRMLQ8N4K4 120 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 PNLDC1Q8NA58 520 aaKnown RBP7.71□□□□□ -1.18
CCDC47-207ENST00000612558 NAXEQ8NCW5 288 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 SLC30A7Q8NEW0 376 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 OR5L1Q8NGL2 311 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 ZCCHC14Q8WYQ9 949 aaKnown RBP7.71□□□□□ -1.18
CCDC47-207ENST00000612558 SPSB1Q96BD6 273 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 GPER1Q99527 375 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 SFXN3Q9BWM7 321 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 GSX2Q9BZM3 304 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 OPA3Q9H6K4 179 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 ASF1BQ9NVP2 202 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 TBCCD1Q9NVR7 557 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 FBLN5Q9UBX5 448 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 RAB22AQ9UL26 194 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF835Q9Y2P0 537 aa7.71□□□□□ -1.18
CCDC47-207ENST00000612558 hCG_2014768A0A024R1R8 64 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 A0A0A6YYH2 397 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF816-ZNF321PA0A0X1KG74 233 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 LINC00854A0A1B0GVQ3 168 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 METTL21EPA6NDL7 271 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 GGT3PA6NGU5 568 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 A6NJ64 397 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 J3QW42 95 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 PLA2G10O15496 165 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 EEF1E1O43324 174 aaKnown RBP7.7□□□□□ -1.18
CCDC47-207ENST00000612558 GMDSO60547 372 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 UBBP0CG47 229 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 GLI4P10075 376 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 CBR1P16152 277 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 PRKACBP22694 351 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 TAS2R20P59543 309 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 RBPJQ06330 500 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 KLRB1Q12918 225 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 GK2Q14410 553 aaPredicted RBP7.7□□□□□ -1.18
CCDC47-207ENST00000612558 CNN3Q15417 329 aaKnown RBP7.7□□□□□ -1.18
CCDC47-207ENST00000612558 KISS1Q15726 138 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF57Q68EA5 555 aaPredicted RBP7.7□□□□□ -1.18
CCDC47-207ENST00000612558 AWAT2Q6E213 333 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 C3P1Q6ZMU1 363 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 CXorf67Q86X51 503 aaPredicted RBP7.7□□□□□ -1.18
CCDC47-207ENST00000612558 WDR31Q8NA23 367 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 SMIM4Q8WVI0 70 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 FAM122AQ96E09 287 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 TECTBQ96PL2 329 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 SPACA5Q96QH8 159 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 ATG5Q9H1Y0 275 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 KCNK15Q9H427 330 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 OBP2BQ9NPH6 170 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 FAIMQ9NVQ4 179 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 GHRLQ9UBU3 117 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 MRPS28Q9Y2Q9 187 aaKnown RBP7.7□□□□□ -1.18
CCDC47-207ENST00000612558 STARD10Q9Y365 291 aa7.7□□□□□ -1.18
CCDC47-207ENST00000612558 A0A1W2PR80 420 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 GABARAPH6UMI1 98 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 LANCL1O43813 399 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 ICMTO60725 284 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 NRASP01111 189 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 NGFP01138 241 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 IGKV3-15P01624 115 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 WNT5AP41221 380 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 ALDH3B1P43353 468 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 OR3A4PP47883 348 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 QRFPP83859 136 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 DGCR2P98153 550 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 PMPCAQ10713 525 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 TSC22D1Q15714 1073 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 MZT2BQ6NZ67 158 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 GLIPR1L1Q6UWM5 242 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 BHLHA15Q7RTS1 189 aaPredicted RBP7.69□□□□□ -1.18
CCDC47-207ENST00000612558 KRT74Q7RTS7 529 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 MRPL21Q7Z2W9 205 aaKnown RBP7.69□□□□□ -1.18
CCDC47-207ENST00000612558 OR2W3Q7Z3T1 314 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 RNF144BQ7Z419 303 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 ZNF101Q8IZC7 436 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 PAQR4Q8N4S7 273 aaPredicted RBP7.69□□□□□ -1.18
CCDC47-207ENST00000612558 FCAMRQ8WWV6 532 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 YIPF5Q969M3 257 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 TRIM63Q969Q1 353 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 CPNE2Q96FN4 548 aaPredicted RBP7.69□□□□□ -1.18
CCDC47-207ENST00000612558 SLC22A4Q9H015 551 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 C11orf54Q9H0W9 315 aaPredicted RBP7.69□□□□□ -1.18
CCDC47-207ENST00000612558 GPR173Q9NS66 373 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 MYEF2Q9P2K5 600 aaKnown RBP7.69□□□□□ -1.18
CCDC47-207ENST00000612558 EIF3KQ9UBQ5 218 aaKnown RBP7.69□□□□□ -1.18
CCDC47-207ENST00000612558 KCNN3Q9UGI6 736 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 AMDHD2Q9Y303 409 aa7.69□□□□□ -1.18
CCDC47-207ENST00000612558 PRR14LQ5THK1 2151 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 OR5H1A6NKK0 313 aa7.68□□□□□ -1.18
CCDC47-207ENST00000612558 TMEM14DPA8MWL7 114 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms