RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 PHC2Q8IXK0 858 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 LINC01356Q8N9X3 169 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 PLPP7Q8NBV4 271 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 C19orf18Q8NEA5 215 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 RPS4Y2Q8TD47 263 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 SPRYD4Q8WW59 207 aaPredicted RBP7.28□□□□□ -1.24
SNCA-212ENST00000611107 HPS1Q92902 700 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 TMEM80Q96HE8 168 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 FAM71F1Q96KD3 344 aaPredicted RBP7.28□□□□□ -1.24
SNCA-212ENST00000611107 OR2V2Q96R30 315 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 FGF23Q9GZV9 251 aaPredicted RBP7.28□□□□□ -1.24
SNCA-212ENST00000611107 DECR2Q9NUI1 292 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 MRPL15Q9P015 296 aaKnown RBP7.28□□□□□ -1.24
SNCA-212ENST00000611107 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 KCNS2Q9ULS6 477 aa7.28□□□□□ -1.24
SNCA-212ENST00000611107 EXOSC1Q9Y3B2 195 aaKnown RBP7.28□□□□□ -1.24
SNCA-212ENST00000611107 TRAPPC2LH3BP13 241 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 H3BSH0 61 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 DENRO43583 198 aaKnown RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 DHRS3O75911 302 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 CYB5R3P00387 301 aaPredicted RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 MT-ND2P03891 347 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 CDK1P06493 297 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 HTR1AP08908 422 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 CCDC159P0C7I6 412 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 UBCP0CG48 685 aaKnown RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 FAHP16930 419 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 MYL12AP19105 171 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 CA6P23280 308 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 CRHBPP24387 322 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 CD200P41217 278 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 MPPED2Q15777 294 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 PRAMEF6Q5VXH4 476 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 KCTD20Q7Z5Y7 419 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 WDR86Q86TI4 376 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 KLHL36Q8N4N3 616 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 ZNF540Q8NDQ6 660 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 CSNK2A3Q8NEV1 391 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 OR14K1Q8NGZ2 314 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 OR13G1Q8NGZ3 307 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 OR10AC1Q8NH08 325 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 OR52N1Q8NH53 320 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 HPSE2Q8WWQ2 592 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 RGP1Q92546 391 aaPredicted RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 ITPKCQ96DU7 683 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 MRPL48Q96GC5 212 aaKnown RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 MEGF10Q96KG7 1140 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 DIRC2Q96SL1 478 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 PAPOLGQ9BWT3 736 aaKnown RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 BEX2Q9BXY8 128 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 TMPRSS13Q9BYE2 586 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 SHARPINQ9H0F6 387 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 RASSF4Q9H2L5 321 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 GCM1Q9NP62 436 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 MMP26Q9NRE1 261 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 TMEM106BQ9NUM4 274 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 HIF1ANQ9NWT6 349 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 FRRS1LQ9P0K9 344 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 OPN4Q9UHM6 478 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 LSM2Q9Y333 95 aaKnown RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 CAB39Q9Y376 341 aaPredicted RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 RHBDD3Q9Y3P4 386 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 SOX21Q9Y651 276 aaPredicted RBP7.27□□□□□ -1.25
SNCA-212ENST00000611107 V9GYS6 101 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 KIAA2026Q5HYC2 2103 aa7.27□□□□□ -1.25
SNCA-212ENST00000611107 STAB1Q9NY15 2570 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 LOC105371242A0A075B767 164 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 ZNF816-ZNF321PA0A0X1KG74 233 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 DHRS7CA6NNS2 312 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 CLDN25C9JDP6 229 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 MYL12BO14950 172 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 PHF1O43189 567 aaPredicted RBP7.26□□□□□ -1.25
SNCA-212ENST00000611107 RGS9O75916 674 aaPredicted RBP7.26□□□□□ -1.25
SNCA-212ENST00000611107 ZFPL1O95159 310 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 PTBP3O95758 552 aaKnown RBP7.26□□□□□ -1.25
SNCA-212ENST00000611107 ISG15P05161 165 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 MSMBP08118 114 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 ADRA2CP18825 462 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 DDOSTP39656 456 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 GATA4P43694 442 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 TGM4P49221 684 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 CCR9P51686 369 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 GTF2A1P52655 376 aaPredicted RBP7.26□□□□□ -1.25
SNCA-212ENST00000611107 DVL1P1P54792 670 aaPredicted RBP7.26□□□□□ -1.25
SNCA-212ENST00000611107 CSNK2BP67870 215 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 ALKBH1Q13686 389 aaKnown RBP7.26□□□□□ -1.25
SNCA-212ENST00000611107 IRF3Q14653 427 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 CDK5R1Q15078 307 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 OR8G1Q15617 311 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 TMEM42Q69YG0 159 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 LYPD2Q6UXB3 125 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 DOK3Q7L591 496 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 KRT74Q7RTS7 529 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 MOGAT3Q86VF5 341 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 KLBQ86Z14 1044 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 EGFL6Q8IUX8 553 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 RDH10Q8IZV5 341 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 STX19Q8N4C7 294 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 OR51A4Q8NGJ6 313 aa7.26□□□□□ -1.25
SNCA-212ENST00000611107 TMEM186Q96B77 213 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms