RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 ZNF691Q5VV52 312 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 LCN12Q6JVE5 192 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 TMEM179BQ7Z7N9 219 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 CDKL3Q8IVW4 592 aaPredicted RBP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 SELENOHQ8IZQ5 122 aaKnown RBP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 FAM9CQ8IZT9 166 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 TMEM61Q8N0U2 210 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 ARRDC1Q8N5I2 433 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 C14orf178Q8N769 122 aaPredicted RBP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 CDRT4Q8N9R6 151 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 WDR31Q8NA23 367 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 CHST4Q8NCG5 386 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 NPBQ8NG41 125 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 OR10Z1Q8NGY1 313 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 OR51A7Q8NH64 312 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 OR4S2Q8NH73 311 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 GEMIN6Q8WXD5 167 aaKnown RBP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 NDRG1Q92597 394 aaKnown RBP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 RORBQ92753 470 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 FAM3DQ96BQ1 224 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 UBE2E2Q96LR5 201 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 IMMP1LQ96LU5 166 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 RNF145Q96MT1 663 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 TIMM29Q9BSF4 260 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 GABARAPL3Q9BY60 117 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 SLC39A1Q9NY26 324 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 CES1P1Q9UKY3 287 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 ZNF257Q9Y2Q1 563 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 TSSC4Q9Y5U2 329 aaPredicted RBP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 PUS1Q9Y606 427 aaKnown RBP eCLIP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 F11RQ9Y624 299 aaKnown RBP1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 OVOS2A0A0G2JMS6 1433 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 OVOS2A0A0J9YW53 1432 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 NAIPQ13075 1403 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 OVOS2Q6IE36 1432 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 KNDC1Q76NI1 1749 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 KIAA1551Q9HCM1 1747 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 MROH7Q68CQ1 1323 aa1.88□□□□□ -2.11
CCDC144B-206ENST00000609959 ARHGEF10O15013 1369 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 LRPPRCP42704 1394 aaKnown RBP1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 DHX57Q6P158 1386 aaKnown RBP1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 CLDN34H7C241 214 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 H7C2Y5 167 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ZNF593O00488 134 aaPredicted RBP1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 GABRPO00591 440 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ITGB1BP1O14713 200 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 SNAI2O43623 268 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 SLC16A7O60669 478 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 CTNSO60931 367 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 BGLAPP02818 100 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 GLAP06280 429 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 TPM3P06753 285 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ZDHHC11BP0C7U3 371 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 SLC35E2BP0CK96 405 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 GGT1P19440 569 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 WARSP23381 471 aaKnown RBP1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 GABRR1P24046 479 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 PCK1P35558 622 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ARL2P36404 184 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 PPICP45877 212 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 OR3A4PP47883 348 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ZNF138P52744 262 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 MLF1P58340 268 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 KDSRQ06136 332 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 PSG7Q13046 419 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 PMS2P3Q13401 168 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 DYNC1I2Q13409 638 aaKnown RBP1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 OR4D1Q15615 310 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 GUCA2BQ16661 112 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 KYAT1Q16773 422 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 NDUFAF6Q330K2 333 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 CCDC14Q49A88 953 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ACTL10Q5JWF8 245 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 THEM4Q5T1C6 240 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 MYOM3Q5VTT5 1437 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 LINC00173Q6ZV60 143 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 C10orf71Q711Q0 1435 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 SSH2Q76I76 1423 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 COX15Q7KZN9 410 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ABHD13Q7L211 337 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 SSX6Q7RTT6 188 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 FAM19A1Q7Z5A9 133 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 NKAIN4Q8IVV8 208 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 FAM71AQ8IYT1 594 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 CA13Q8N1Q1 262 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 STPG2Q8N412 459 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 CBR4Q8N4T8 237 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 MREGQ8N565 214 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 ZFP41Q8N8Y5 198 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 C11orf72Q8NBR9 251 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 OR2L8Q8NGY9 312 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 FANK1Q8TC84 345 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 OR51E1Q8TCB6 317 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 MCOLN3Q8TDD5 553 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 FAM151AQ8WW52 585 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 TMEM234Q8WY98 164 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 TNFRSF14Q92956 283 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 CREB3L1Q96BA8 519 aa1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 RPUSD4Q96CM3 377 aaKnown RBP1.87□□□□□ -2.11
CCDC144B-206ENST00000609959 LRRC45Q96CN5 670 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms