RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ZNF664Q8N3J9 261 aa13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 OR9K2Q8NGE7 335 aa13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 OR51F2Q8NH61 342 aa13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 IFI44Q8TCB0 444 aa13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 RAB24Q969Q5 203 aa13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 FAM3DQ96BQ1 224 aa13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 LAMP5Q9UJQ1 280 aa13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 C19orf53Q9UNZ5 99 aaPredicted RBP13.68□□□□□ -0.22
PPFIA3-206ENST00000602655 A0A1B0GTI1 187 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 DCDC2BA2VCK2 349 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 HCRTR2O43614 444 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 STK17BO94768 372 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 SMIM10L1P0DMW3 83 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 EPHA8P29322 1005 aaPredicted RBP13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 RPS23P62266 143 aaKnown RBP13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 CDRT4Q8N9R6 151 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 CLDN23Q96B33 292 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 SMIM10Q96HG1 83 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 MRI1Q9BV20 369 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 MTHFD2LQ9H903 347 aaPredicted RBP13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 ZNF346Q9UL40 294 aaKnown RBP13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 GEMIN2O14893 280 aaKnown RBP13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 TCF21O43680 179 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 NAAAQ02083 359 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 DUSP8Q13202 625 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 RAB11BQ15907 218 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 PMS2CLQ68D20 193 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 ANKRD16Q6P6B7 361 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 ADAD2Q8NCV1 583 aaKnown RBP13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 NMNAT3Q96T66 252 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 WNT5BQ9H1J7 359 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 CYTL1Q9NRR1 136 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 DCHS1Q96JQ0 3298 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 A8MWP6 167 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 THY1P04216 161 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 SERPINA2P20848 420 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 FHITP49789 147 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 CYCSP99999 105 aaKnown RBP13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 RNF151Q2KHN1 245 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 OR10AC1Q8NH08 325 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 STT3BQ8TCJ2 826 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 ADAMTS17Q8TE56 1095 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 CCDC74BQ96LY2 380 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 TUBA4BQ9H853 241 aa13.67□□□□□ -0.22
PPFIA3-206ENST00000602655 HEATR5AQ86XA9 2040 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 TGIF2-C20orf24A0A0A6YYL0 155 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 NUDT21O43809 227 aaKnown RBP13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 C1QL1O75973 258 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 PTBP3O95758 552 aaKnown RBP13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 CD37P11049 281 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 CHATP28329 748 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 HOXA6P31267 233 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 OR1Q1Q15612 314 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 HEPN1Q6WQI6 88 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 HIST3H2BBQ8N257 126 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 OR2L13Q8N349 312 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 POC1BQ8TC44 478 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 DNASE2BQ8WZ79 361 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 TMEM208Q9BTX3 173 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 SHISA8B8ZZ34 492 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 SLC35E2P0CK97 266 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 HIST1H1CP16403 213 aaKnown RBP13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 PRTGQ2VWP7 1150 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 GPR137CQ8N3F9 429 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 OR6X1Q8NH79 312 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 SMIM8Q96KF7 97 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 COMMD4Q9H0A8 199 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 F8VVB4 439 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 F8VWA3 439 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 H0YIZ8 118 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 CNOT4O95628 575 aaKnown RBP13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 TSPAN7P41732 249 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 FRKP42685 505 aaPredicted RBP13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 TMPRSS11FQ6ZWK6 438 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 VDAC3Q9Y277 283 aa13.66□□□□□ -0.22
PPFIA3-206ENST00000602655 HSPA12AO43301 675 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 TRGC1P0CF51 173 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 RPS18P62269 152 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 RAB1AP62820 205 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 SQSTM1Q13501 440 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 RAB32Q13637 225 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 ALG10BQ5I7T1 473 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 NCR3LG1Q68D85 454 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 NTNG2Q96CW9 530 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 ZNF700Q9H0M5 742 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 SRA1Q9HD15 236 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 APC2O95996 2303 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 DOK2O60496 412 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 RAMP1O60894 148 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 NSA2O95478 260 aaKnown RBP13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 MBPP02686 304 aaPredicted RBP13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 EFNA3P52797 238 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 AWAT2Q6E213 333 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 NPSR1Q6W5P4 371 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 BIVMQ86UB2 503 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 MARCH3Q86UD3 253 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 GVQW1Q8N7I0 195 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 OR51A4Q8NGJ6 313 aa13.65□□□□□ -0.22
PPFIA3-206ENST00000602655 SEH1LQ96EE3 360 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms