RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CRB2Q5IJ48 1285 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 LYPLAL1Q5VWZ2 237 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 TOMM20LQ6UXN7 152 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 Q6ZSR9 355 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 CFAP52Q8N1V2 620 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 KLHDC1Q8N7A1 406 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 NHLRC2Q8NBF2 726 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 OR10Q1Q8NGQ4 319 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 SUSD6Q92537 303 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 SLAMF6Q96DU3 332 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 SLC25A38Q96DW6 304 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 NMES1Q9C002 83 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 RDH14Q9HBH5 336 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 PXMP2Q9NR77 195 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 GPR27Q9NS67 375 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF391Q9UJN7 358 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 PSG8Q9UQ74 426 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 YIPF1Q9Y548 306 aa7.89□□□□□ -1.15
COMMD3-215ENST00000602574 IGHV2-26A0A0B4J1V2 119 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 TRAV34A0A0B4J273 112 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 IGLC7A0M8Q6 106 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 SERINC4A6NH21 518 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF891A8MT65 544 aaPredicted RBP7.88□□□□□ -1.15
COMMD3-215ENST00000602574 TMPRSS11DO60235 418 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 PPP1R3DO95685 299 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 IGHA1P01876 353 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 EN2P19622 333 aaPredicted RBP7.88□□□□□ -1.15
COMMD3-215ENST00000602574 CELP19835 753 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 NMBRP28336 390 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 CD34P28906 385 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 SRD5A2P31213 254 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 PPICP45877 212 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 MTNR1AP48039 350 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 RPL34P49207 117 aaKnown RBP7.88□□□□□ -1.15
COMMD3-215ENST00000602574 TAS2R41P59536 307 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 RPL23AP62750 156 aaKnown RBP7.88□□□□□ -1.15
COMMD3-215ENST00000602574 LTC4SQ16873 150 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 FAM174BQ3ZCQ3 159 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 IFI44LQ53G44 452 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 TRMT12Q53H54 448 aaKnown RBP7.88□□□□□ -1.15
COMMD3-215ENST00000602574 PHYHD1Q5SRE7 291 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 PHF19Q5T6S3 580 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 PRSS45Q7RTY3 260 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 C5orf17Q8NAS9 161 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 OR51A2Q8NGJ7 313 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 OR2Y1Q8NGV0 311 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 TSPAN32Q96QS1 320 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 OR5B12Q96R08 314 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 MACROD1Q9BQ69 325 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 OR11A1Q9GZK7 315 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 CORO2BQ9UQ03 480 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 HCFC2Q9Y5Z7 792 aa7.88□□□□□ -1.15
COMMD3-215ENST00000602574 ZNF727A8MUV8 499 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 F5H5T6 163 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 SLC17A3O00476 420 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 TNFRSF13BO14836 293 aaPredicted RBP7.87□□□□□ -1.15
COMMD3-215ENST00000602574 CNMDO75829 334 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 IGLC2P0DOY2 106 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 IGLC3P0DOY3 106 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 HMGCS2P54868 508 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 FAM3BP58499 235 aaPredicted RBP7.87□□□□□ -1.15
COMMD3-215ENST00000602574 TAS2R30P59541 319 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 ZXDBP98169 803 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 RUNX1Q01196 453 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 FKBP1CQ5VVH2 108 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 SMIM5Q71RC9 77 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 LGI3Q8N145 548 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 OR10G4Q8NGN3 311 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 KTI12Q96EK9 354 aaPredicted RBP7.87□□□□□ -1.15
COMMD3-215ENST00000602574 NUDT9Q9BW91 350 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 DPY30Q9C005 99 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 EIF5A2Q9GZV4 153 aaKnown RBP7.87□□□□□ -1.15
COMMD3-215ENST00000602574 ALG9Q9H6U8 611 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 TAF9BQ9HBM6 251 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 OR2S2Q9NQN1 319 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 SPANXA1Q9NS26 97 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 FBXW11Q9UKB1 542 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 SLC7A7Q9UM01 511 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 UBR3Q6ZT12 1888 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 TMEM213A2RRL7 107 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 HSD17B6O14756 317 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 H1F0P07305 194 aaKnown RBP7.87□□□□□ -1.15
COMMD3-215ENST00000602574 IGLC1P0CG04 106 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 CTSEP14091 401 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 SDHBP21912 280 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 XCR1P46094 333 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 CX3CR1P49238 355 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 PLP1P60201 277 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 SELENOWP63302 87 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 HMGCS1Q01581 520 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 C10orf111Q8N326 155 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 TCEANCQ8N8B7 351 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 SDSLQ96GA7 329 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 CHRDL1Q9BU40 450 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 ACER3Q9NUN7 267 aa7.87□□□□□ -1.15
COMMD3-215ENST00000602574 MRPL15Q9P015 296 aaKnown RBP7.87□□□□□ -1.15
COMMD3-215ENST00000602574 TRBV2A0A0J9YWF9 115 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 hCG_38984A0A1B0GV85 526 aa7.86□□□□□ -1.15
COMMD3-215ENST00000602574 F8WDY8 70 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms