RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 LRP12Q9Y561 859 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 PCDHGB1Q9Y5G3 927 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 TMEM14AQ9Y6G1 99 aa13.08□□□□□ -0.32
VRK3-221ENST00000600284 IGHV3OR15-7A0A075B7D8 119 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 A0A0U1RQV5 110 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 ZNF850A8MQ14 1090 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.07□□□□□ -0.32
VRK3-221ENST00000600284 GSC2O15499 205 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 HOXA3O43365 443 aaPredicted RBP13.07□□□□□ -0.32
VRK3-221ENST00000600284 SPRY1O43609 319 aaPredicted RBP13.07□□□□□ -0.32
VRK3-221ENST00000600284 ZNF254O75437 659 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 SFTPBP07988 381 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 ATP6V1B1P15313 513 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 ACKR3P25106 362 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 ESRRGP62508 458 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 CSNK2BP67870 215 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 POU4F2Q12837 409 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 APOFQ13790 326 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 WDR38Q5JTN6 314 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 LCN1P1Q5VSP4 162 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 FAHD1Q6P587 224 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 LY6G5BQ8NDX9 201 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 OR8B12Q8NGG6 310 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 ASB17Q8WXJ9 295 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 UTP4Q969X6 686 aaKnown RBP13.07□□□□□ -0.32
VRK3-221ENST00000600284 LYZL4Q96KX0 146 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 HIST1H2AAQ96QV6 131 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 CCL13Q99616 98 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 MROQ9BYG7 248 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 PPP1R3EQ9H7J1 279 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 HAO2Q9NYQ3 351 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 TVP23BQ9NYZ1 205 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 RPUSD1Q9UJJ7 312 aaKnown RBP13.07□□□□□ -0.32
VRK3-221ENST00000600284 KLHDC2Q9Y2U9 406 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
VRK3-221ENST00000600284 ZNF816-ZNF321PA0A0X1KG74 233 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 FCN3O75636 299 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 MAP2K3P46734 347 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 TGM4P49221 684 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 DAPP51397 102 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 ARF6P62330 175 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 ROM1Q03395 351 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
VRK3-221ENST00000600284 CDONQ4KMG0 1287 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 ZDHHC23Q8IYP9 409 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 OR5K1Q8NHB7 308 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 ST8SIA4Q92187 359 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 PIGCQ92535 297 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 RNF170Q96K19 258 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 PKP2Q99959 881 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 ACOXLQ9NUZ1 547 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 MMP24Q9Y5R2 645 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 POMT1Q9Y6A1 747 aa13.06□□□□□ -0.32
VRK3-221ENST00000600284 IGHV1-69DA0A0B4J2H0 117 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 A0A1B0GUS0 222 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 TMEM269A0A1B0GVZ9 245 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 CCDC182A6NF36 153 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 NDUFB3O43676 98 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 IGHV1-69P01742 117 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 HCCSP53701 268 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 LRRC10Q5BKY1 277 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 STUMQ69YW2 141 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 ZNF679Q8IYX0 411 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 SCCPDHQ8NBX0 429 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 TMIGD2Q96BF3 282 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 MED30Q96HR3 178 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 RAB3IPQ96QF0 476 aaPredicted RBP13.05□□□□□ -0.32
VRK3-221ENST00000600284 MNTQ99583 582 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 CADM1Q9BY67 442 aaKnown RBP13.05□□□□□ -0.32
VRK3-221ENST00000600284 SLITRK2Q9H156 845 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 ZNF696Q9H7X3 374 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 UNKLQ9H9P5 680 aaKnown RBP13.05□□□□□ -0.32
VRK3-221ENST00000600284 FAM206AQ9NX38 181 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 DNAJB11Q9UBS4 358 aa13.05□□□□□ -0.32
VRK3-221ENST00000600284 A0A1B0GVI7 797 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 AMY2BP19961 511 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 RASSF2P50749 326 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 ACTR3P61158 418 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 RPL15P61313 204 aaKnown RBP13.04□□□□□ -0.32
VRK3-221ENST00000600284 BNIP1Q12981 228 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 CEACAM21Q3KPI0 293 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 PRR31Q5SQ13 230 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 ZBTB37Q5TC79 503 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 RUSC1-AS1Q66K80 236 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 METAP1DQ6UB28 335 aaPredicted RBP13.04□□□□□ -0.32
VRK3-221ENST00000600284 KCTD8Q6ZWB6 473 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 CMTM4Q8IZR5 234 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 KIR3DL3Q8N743 410 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 C8orf46Q8TAG6 207 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 FAM81AQ8TBF8 368 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 NPRL2Q8WTW4 380 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 SSMEM1Q8WWF3 244 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 HPSE2Q8WWQ2 592 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 RPL3LQ92901 407 aaKnown RBP13.04□□□□□ -0.32
VRK3-221ENST00000600284 LHX4Q969G2 390 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 OR8B4Q96RC9 309 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 PBOV1Q9GZY1 135 aa13.04□□□□□ -0.32
VRK3-221ENST00000600284 H2AFY2Q9P0M6 372 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms