RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 KLHL36Q8N4N3 616 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 GCSAMQ8N6F7 178 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 ZNF555Q8NEP9 628 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 SEMA6DQ8NFY4 1073 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 OR5A2Q8NGI9 324 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 OR11L1Q8NGX0 322 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 GAL3ST1Q99999 423 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 TMEM246Q9BRR3 403 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 NARFLQ9H6Q4 476 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 NKX1-2Q9UD57 310 aaPredicted RBP14.76□□□□□ -0.05
USHBP1-209ENST00000598570 SLC22A13Q9Y226 551 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 RPL36Q9Y3U8 105 aaKnown RBP14.76□□□□□ -0.05
USHBP1-209ENST00000598570 PPIAL4AQ9Y536 164 aa14.76□□□□□ -0.05
USHBP1-209ENST00000598570 CEACAM18A8MTB9 384 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.75□□□□□ -0.05
USHBP1-209ENST00000598570 FADS2O95864 444 aaKnown RBP14.75□□□□□ -0.05
USHBP1-209ENST00000598570 FAM157CP0CG43 387 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 PCMT1P22061 227 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 GATA3P23771 443 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 CR1LQ2VPA4 569 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 BCL2L15Q5TBC7 163 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 WDR82Q6UXN9 313 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 ZNF841Q6ZN19 808 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 GLCCI1Q86VQ1 547 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 YIPF7Q8N8F6 280 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 OR10Z1Q8NGY1 313 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 DVL3Q92997 716 aaPredicted RBP14.75□□□□□ -0.05
USHBP1-209ENST00000598570 TBX5Q99593 518 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 PAPOLGQ9BWT3 736 aaKnown RBP14.75□□□□□ -0.05
USHBP1-209ENST00000598570 TTTY10Q9BZA0 68 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 OR51I2Q9H344 312 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 HIF1ANQ9NWT6 349 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 MIOXQ9UGB7 285 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 MYRFQ9Y2G1 1151 aa14.75□□□□□ -0.05
USHBP1-209ENST00000598570 FBN1P35555 2871 aaKnown RBP14.74□□□□□ -0.05
USHBP1-209ENST00000598570 DAPL1A0PJW8 107 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 ZNF850A8MQ14 1090 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 J3QLI3 93 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 LGALS8O00214 317 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 NDUFA2O43678 99 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 GNALP38405 381 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 KIR3DL2P43630 455 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 SLC34A1Q06495 639 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 LRRC36Q1X8D7 754 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 TUSC1Q2TAM9 212 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 C11orf91Q3C1V1 193 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 CHRFAM7AQ494W8 412 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 KLHL22Q53GT1 634 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 LAIR2Q6ISS4 152 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 DCDC5Q6ZRR9 648 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 DOK3Q7L591 496 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 DHRSXQ8N5I4 330 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 OR2G2Q8NGZ5 317 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 OR8S1Q8NH09 359 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 TFAP2CQ92754 450 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 C10orf35Q96D05 121 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 PELI1Q96FA3 418 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 MYCBPQ99417 103 aaPredicted RBP14.74□□□□□ -0.05
USHBP1-209ENST00000598570 MICU1Q9BPX6 476 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 RTL8AQ9BWD3 113 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 TRIM36Q9NQ86 728 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 UFSP2Q9NUQ7 469 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 C1orf123Q9NWV4 160 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 ERVK13-1Q9NX77 482 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 FRRS1LQ9P0K9 344 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 KAAG1Q9UBP8 84 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 LRCH1Q9Y2L9 728 aa14.74□□□□□ -0.05
USHBP1-209ENST00000598570 IGHV3-64DA0A0J9YX35 117 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ANXA2P2A6NMY6 339 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 SRRM5B3KS81 715 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 FOXH1O75593 365 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ACAA1P09110 424 aaPredicted RBP14.73□□□□□ -0.05
USHBP1-209ENST00000598570 OR12D2P58182 307 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ACTA2P62736 377 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ACTG2P63267 376 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 SMN1Q16637 294 aaKnown RBP14.73□□□□□ -0.05
USHBP1-209ENST00000598570 GFOD2Q3B7J2 385 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 WDR38Q5JTN6 314 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 FAM201AQ5SY85 155 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ATPAF1Q5TC12 328 aaPredicted RBP14.73□□□□□ -0.05
USHBP1-209ENST00000598570 C1orf229Q6ZS94 237 aaPredicted RBP14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ZNF826PQ6ZT77 177 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ZDHHC23Q8IYP9 409 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 OR52I1Q8NGK6 324 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 NRG4Q8WWG1 115 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 PIGCQ92535 297 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 PLCXD1Q9NUJ7 323 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ACOXLQ9NUZ1 547 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 ENPP5Q9UJA9 477 aa14.73□□□□□ -0.05
USHBP1-209ENST00000598570 OR5B21A6NL26 309 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 OR4C45A6NMZ5 311 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 TRAPPC2LH3BP13 241 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 FSHBP01225 129 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 GRPP07492 148 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 LIMS3P0CW19 117 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 LIMS4P0CW20 117 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 IRF2P14316 349 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 MUC1P15941 1255 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-209ENST00000598570 CAPGP40121 348 aa14.72□□□□□ -0.05
USHBP1-209ENST00000598570 NANOS3P60323 173 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms