RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SNRPGP62308 76 aaKnown RBP11.48□□□□□ -0.57
SCAF1-203ENST00000598359 GNB2P62879 340 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 GRB2P62993 217 aaKnown RBP11.48□□□□□ -0.57
SCAF1-203ENST00000598359 ACTG1P63261 375 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 POU4F2Q12837 409 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 SMN1Q16637 294 aaKnown RBP11.48□□□□□ -0.57
SCAF1-203ENST00000598359 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 SLC16A9Q7RTY1 509 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 CPOQ8IVL8 374 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 ZDHHC22Q8N966 263 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 RNF133Q8WVZ7 376 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 TRUB1Q8WWH5 349 aaKnown RBP11.48□□□□□ -0.57
SCAF1-203ENST00000598359 UBE2FQ969M7 185 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 SGK3Q96BR1 496 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 C12orf43Q96C57 262 aaKnown RBP11.48□□□□□ -0.57
SCAF1-203ENST00000598359 DUX5Q96PT3 197 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 MRI1Q9BV20 369 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 SUCNR1Q9BXA5 334 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 MARCH7Q9H992 704 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 FN3KRPQ9HA64 309 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 C1orf123Q9NWV4 160 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 ERVK-18Q9QC07 812 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 MIOXQ9UGB7 285 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 KLHDC2Q9Y2U9 406 aa11.48□□□□□ -0.57
SCAF1-203ENST00000598359 XRCC2O43543 280 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 GMDSO60547 372 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 MT-ND2P03891 347 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 IGHV4-38-2P0DP08 117 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 PIPP12273 146 aaPredicted RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 PAICSP22234 425 aaKnown RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 OPRL1P41146 370 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 SLC15A1P46059 708 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 BLVRAP53004 296 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 HCCSP53701 268 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 GP2P55259 537 aaKnown RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 FAM3AP98173 230 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 CDK5Q00535 292 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 EMX1Q04741 257 aaPredicted RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 PAX8Q06710 450 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 TBCEQ15813 527 aaPredicted RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 TIGD6Q17RP2 521 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 SLC25A30Q5SVS4 291 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 SYT6Q5T7P8 510 aaPredicted RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 UBE2UQ5VVX9 321 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 USP43Q70EL4 1123 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 PRSS45Q7RTY3 260 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 OR8B3Q8NGG8 313 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 THEM6Q8WUY1 208 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 FCGR1BQ92637 280 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 SPSB4Q96A44 273 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 REEP6Q96HR9 211 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 OR8B2Q96RD0 313 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 SLC22A4Q9H015 551 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 IMPAD1Q9NX62 359 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 CNOT2Q9NZN8 540 aaKnown RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 MRPL15Q9P015 296 aaKnown RBP11.47□□□□□ -0.57
SCAF1-203ENST00000598359 AASSQ9UDR5 926 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 NUP50Q9UKX7 468 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 MEGF8Q7Z7M0 2845 aa11.47□□□□□ -0.57
SCAF1-203ENST00000598359 IGHV3OR15-7A0A075B7D8 119 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 IGHV2-70DA0A0C4DH43 119 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 hCG_1807616A0A1W2PRN6 198 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 A6NLC8 198 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 PTGES3LE9PB15 166 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 H3BMQ9 156 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 KCNAB3O43448 404 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 CDK1P06493 297 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 H2BFMP0C1H6 154 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 EGR1P18146 543 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 FPR2P25090 351 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 RPS7P62081 194 aaKnown RBP11.46□□□□□ -0.57
SCAF1-203ENST00000598359 IRF3Q14653 427 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 OR8B8Q15620 311 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 OCLNQ16625 522 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 WDR25Q64LD2 544 aaPredicted RBP11.46□□□□□ -0.57
SCAF1-203ENST00000598359 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 ZNF841Q6ZN19 808 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 DCDC5Q6ZRR9 648 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 SHFQ7M4L6 423 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 WDR86Q86TI4 376 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 RAB2BQ8WUD1 216 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 RAB40AQ8WXH6 277 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 MYDGFQ969H8 173 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 ERGIC1Q969X5 290 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 DACT3Q96B18 629 aaPredicted RBP11.46□□□□□ -0.57
SCAF1-203ENST00000598359 PGAM5Q96HS1 289 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 PLEKHA8Q96JA3 519 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 ZNF48Q96MX3 618 aaPredicted RBP11.46□□□□□ -0.57
SCAF1-203ENST00000598359 ACOT13Q9NPJ3 140 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 CTSZQ9UBR2 303 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 CLN8Q9UBY8 286 aa11.46□□□□□ -0.57
SCAF1-203ENST00000598359 NOP16Q9Y3C1 178 aaKnown RBP11.46□□□□□ -0.57
SCAF1-203ENST00000598359 hCG_38984A0A1B0GV85 526 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 ANKRD30BLA7E2S9 258 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 C22orf46C9J442 243 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 TRIM77I1YAP6 450 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 M0R129 80 aa11.45□□□□□ -0.58
SCAF1-203ENST00000598359 LGALS8O00214 317 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms