RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 MRPL21Q7Z2W9 205 aaKnown RBP12.65□□□□□ -0.38
LIG1-214ENST00000597146 FGFRL1Q8N441 504 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 BOLLQ8N9W6 283 aaKnown RBP12.65□□□□□ -0.38
LIG1-214ENST00000597146 SPERTQ8NA61 448 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 ZNF511Q8NB15 262 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 OR4Q3Q8NH05 313 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 COPS4Q9BT78 406 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 OR51V1Q9H2C8 321 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 TMEM100Q9NV29 134 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 MRPL22Q9NWU5 206 aaKnown RBP12.65□□□□□ -0.38
LIG1-214ENST00000597146 CAB39Q9Y376 341 aaPredicted RBP12.65□□□□□ -0.38
LIG1-214ENST00000597146 PCDHGB5Q9Y5G0 923 aa12.65□□□□□ -0.38
LIG1-214ENST00000597146 A0A1B0GVI7 797 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 PRR23D1E9PI22 279 aaPredicted RBP12.64□□□□□ -0.39
LIG1-214ENST00000597146 NPFFO15130 113 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 CIB2O75838 187 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 PAHP00439 452 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 ACSM4P0C7M7 580 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 PRR23D2P0DMB1 279 aaPredicted RBP12.64□□□□□ -0.39
LIG1-214ENST00000597146 SPI1P17947 270 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 GSTT1P30711 240 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 EMX1Q04741 257 aaPredicted RBP12.64□□□□□ -0.39
LIG1-214ENST00000597146 MAB21L1Q13394 359 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 CDONQ4KMG0 1287 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 PGAP1Q75T13 922 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 DCXRQ7Z4W1 244 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 NDUFA11Q86Y39 141 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.64□□□□□ -0.39
LIG1-214ENST00000597146 IQCF1Q8N6M8 205 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 OR11L1Q8NGX0 322 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 Q8TCH9 128 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 CITED2Q99967 270 aaPredicted RBP12.64□□□□□ -0.39
LIG1-214ENST00000597146 CADM1Q9BY67 442 aaKnown RBP12.64□□□□□ -0.39
LIG1-214ENST00000597146 ONECUT1Q9UBC0 465 aa12.64□□□□□ -0.39
LIG1-214ENST00000597146 ARRDC5A6NEK1 342 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 GGT3PA6NGU5 568 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 FAM183AA6NL82 134 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 M0R135 149 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 OSMP13725 252 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 HSD11B1P28845 292 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 RPS27P42677 84 aaKnown RBP12.63□□□□□ -0.39
LIG1-214ENST00000597146 GATA4P43694 442 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 PRKXP51817 358 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 RPS7P62081 194 aaKnown RBP12.63□□□□□ -0.39
LIG1-214ENST00000597146 EIF2B1Q14232 305 aaKnown RBP12.63□□□□□ -0.39
LIG1-214ENST00000597146 MPPED2Q15777 294 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 KLHL12Q53G59 568 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 C1orf146Q5VVC0 180 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 FBXW12Q6X9E4 464 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 NAA40Q86UY6 237 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 ERI1Q8IV48 349 aaKnown RBP12.63□□□□□ -0.39
LIG1-214ENST00000597146 ZNF799Q96GE5 643 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 MAP6Q96JE9 813 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 DDOQ99489 341 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 SP140LQ9H930 580 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 MED20Q9H944 212 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 CMC2Q9NRP2 79 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 KPTNQ9Y664 436 aa12.63□□□□□ -0.39
LIG1-214ENST00000597146 TCRBV3S1A0A5B6 114 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 MEIOCA2RUB1 952 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 MEGF11A6BM72 1044 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 LGALS8O00214 317 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 DVL1O14640 695 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 TIPRLO75663 272 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 APOC1P02654 83 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 CLUP10909 449 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 SAA4P35542 130 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 HABP2Q14520 560 aaPredicted RBP12.62□□□□□ -0.39
LIG1-214ENST00000597146 OR8B8Q15620 311 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 DRAM2Q6UX65 266 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 SHFQ7M4L6 423 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 TMEM179BQ7Z7N9 219 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 OR6N2Q8NGY6 317 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 ZNRF4Q8WWF5 429 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 ST8SIA4Q92187 359 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 SLAMF6Q96DU3 332 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 INTS14Q96SY0 518 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 KCNJ15Q99712 375 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 CNTD2Q9H8S5 307 aa12.62□□□□□ -0.39
LIG1-214ENST00000597146 RPUSD1Q9UJJ7 312 aaKnown RBP12.62□□□□□ -0.39
LIG1-214ENST00000597146 NOP16Q9Y3C1 178 aaKnown RBP12.62□□□□□ -0.39
LIG1-214ENST00000597146 A0A1B0GW55 424 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 IQCF6A8MYZ5 107 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 TBX1O43435 398 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 GLCEO94923 617 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 GYPAP02724 150 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4L2P0CJ85 424 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4L3P0CJ86 424 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4L4P0CJ87 422 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4L5P0CJ88 424 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4L6P0CJ89 424 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4L7P0CJ90 424 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 EEF1B2P24534 225 aaKnown RBP12.61□□□□□ -0.39
LIG1-214ENST00000597146 SNAPC1Q16533 368 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 RSPO1Q2MKA7 263 aaPredicted RBP12.61□□□□□ -0.39
LIG1-214ENST00000597146 PLBD1Q6P4A8 553 aa12.61□□□□□ -0.39
LIG1-214ENST00000597146 DUX4L9Q6RFH8 374 aaPredicted RBP12.61□□□□□ -0.39
LIG1-214ENST00000597146 METAP1DQ6UB28 335 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms