RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 KRT8P05787 483 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 LIPFP07098 398 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 ACKR3P25106 362 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 CD80P33681 288 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 RBMXP38159 391 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 HCCSP53701 268 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 BCL2L15Q5TBC7 163 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 WDR82Q6UXN9 313 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 WDR86Q86TI4 376 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 OR5P3Q8WZ94 311 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 PIGCQ92535 297 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 DACT3Q96B18 629 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 LYZL4Q96KX0 146 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 TECTBQ96PL2 329 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 PKP2Q99959 881 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 KAAG1Q9UBP8 84 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 COPS3Q9UNS2 423 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 R4GMQ9 66 aa14.79□□□□□ -0.04
SHKBP1-204ENST00000594862 OR5B21A6NL26 309 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 PSMD9O00233 223 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ECDO95905 644 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ALPLP05186 524 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 OR2T7P0C7T2 308 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ATP6V1E1P36543 226 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ALDH3A2P51648 485 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 RIPPLY1Q0D2K3 151 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 SFRP4Q6FHJ7 346 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 LYPD2Q6UXB3 125 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF841Q6ZN19 808 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ZNF826PQ6ZT77 177 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 SLC36A1Q7Z2H8 476 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 BCDIN3DQ7Z5W3 292 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 OR51G2Q8NGK0 314 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 OR2T27Q8NH04 317 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 UPRTQ96BW1 309 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 NUDT16L1Q9BRJ7 211 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ZMAT3Q9HA38 289 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 GPR84Q9NQS5 396 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 ENPP5Q9UJA9 477 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 SNX5Q9Y5X3 404 aa14.78□□□□□ -0.04
SHKBP1-204ENST00000594862 SNTNA6NMZ2 147 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 DHRS7CA6NNS2 312 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 SRRM5B3KS81 715 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 H3BNX3 289 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 CDIPTO14735 213 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 DHRS3O75911 302 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 IGLV3-1P01715 115 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 BPIFB3P59826 476 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 GNG3P63215 75 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 CSNK2BP67870 215 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 FAM76BQ5HYJ3 339 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 KCTD8Q6ZWB6 473 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 FAM90A1Q86YD7 464 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 C11orf53Q8IXP5 236 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 PNLDC1Q8NA58 520 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 C19orf18Q8NEA5 215 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 RNF170Q96K19 258 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 SLC6A7Q99884 636 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 DNTTIP1Q9H147 329 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 GTF2A1LQ9UNN4 478 aa14.77□□□□□ -0.05
SHKBP1-204ENST00000594862 EI24O14681 340 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 TNFRSF13BO14836 293 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 GPR37O15354 613 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 SULT1C4O75897 302 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 VENTXO95231 258 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 ACTC1P68032 377 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 ACTA1P68133 377 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 CEACAM21Q3KPI0 293 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 MEDAGQ5VYS4 303 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 ELMOD2Q8IZ81 293 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 CCDC54Q8NEL0 328 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 OR5A2Q8NGI9 324 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 OR51E1Q8TCB6 317 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 FAM216AQ8WUB2 273 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 FAM71F1Q96KD3 344 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 HRASLS5Q96KN8 279 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 DMRTB1Q96MA1 342 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 MYCBPQ99417 103 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 C9orf16Q9BUW7 83 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 TTTY10Q9BZA0 68 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 CTSZQ9UBR2 303 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 OR52A1Q9UKL2 312 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 DOCK11Q5JSL3 2073 aa14.76□□□□□ -0.05
SHKBP1-204ENST00000594862 ARHGAP32A7KAX9 2087 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 NKX6-3A6NJ46 265 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 PRR32B1ATL7 298 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 TMPRSS2O15393 492 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 SRSF10O75494 262 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 GYPAP02724 150 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 TTRP02766 147 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 EGR1P18146 543 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 POLR2IP36954 125 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 MTNR1AP48039 350 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 SRSF2Q01130 221 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 MFGE8Q08431 387 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 SLC25A30Q5SVS4 291 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 PLEKHG7Q6ZR37 379 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 C9orf139Q6ZV77 190 aa14.75□□□□□ -0.05
SHKBP1-204ENST00000594862 FAM220AQ7Z4H9 259 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms