RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 TMPRSS11AQ6ZMR5 421 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 MUC20Q8N307 709 aaPredicted RBP21.7■■□□□ 1.06
TRIM28-204ENST00000594806 OR14K1Q8NGZ2 314 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 OR5P3Q8WZ94 311 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 GGHQ92820 318 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 DVL3Q92997 716 aaPredicted RBP21.7■■□□□ 1.06
TRIM28-204ENST00000594806 C10orf35Q96D05 121 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 RAB39BQ96DA2 213 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 RRP15Q9Y3B9 282 aaKnown RBP21.7■■□□□ 1.06
TRIM28-204ENST00000594806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.7■■□□□ 1.062e-10■■■■□ 23
TRIM28-204ENST00000594806 MTORP42345 2549 aa21.7■■□□□ 1.06
TRIM28-204ENST00000594806 MDH2P40926 338 aaKnown RBP21.69■■□□□ 1.06
TRIM28-204ENST00000594806 PMELP40967 661 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 GBX2P52951 348 aaPredicted RBP21.69■■□□□ 1.06
TRIM28-204ENST00000594806 ALKBH1Q13686 389 aaKnown RBP21.69■■□□□ 1.06
TRIM28-204ENST00000594806 MPPED2Q15777 294 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 CEACAM21Q3KPI0 293 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 IZUMO2Q6UXV1 221 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 LRRC28Q86X40 367 aaPredicted RBP21.69■■□□□ 1.06
TRIM28-204ENST00000594806 SPICQ8N5J4 248 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 UFSP2Q9NUQ7 469 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 DCAF16Q9NXF7 216 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 FRRS1LQ9P0K9 344 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 RNF7Q9UBF6 113 aa21.69■■□□□ 1.06
TRIM28-204ENST00000594806 GRPP07492 148 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 MYF6P23409 242 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 VHLP40337 213 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 KIR3DL2P43630 455 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 TGM4P49221 684 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 LMO4P61968 165 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 FAM76BQ5HYJ3 339 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 CLVS2Q5SYC1 327 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 TMEM42Q69YG0 159 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 LAIR2Q6ISS4 152 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 OR1M1Q8NGA1 313 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 OR5A2Q8NGI9 324 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 GAL3ST1Q99999 423 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 ANKRD60Q9BZ19 345 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 ISG20L2Q9H9L3 353 aaKnown RBP21.68■■□□□ 1.06
TRIM28-204ENST00000594806 PSORS1C1Q9UIG5 152 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 HIVEP2P31629 2446 aa21.68■■□□□ 1.06
TRIM28-204ENST00000594806 IGHV3-64DA0A0J9YX35 117 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 ISPDA4D126 451 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 A6NLC8 198 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 WNT9BO14905 357 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 NRASP01111 189 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 CCDC159P0C7I6 412 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 FAHP16930 419 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 ST3GAL4Q11206 333 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 CCDC58Q4VC31 144 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 KLHL36Q8N4N3 616 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 LINC01356Q8N9X3 169 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 BPIFB6Q8NFQ5 453 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 RNF170Q96K19 258 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 TLNRD1Q9H1K6 362 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 NARFLQ9H6Q4 476 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 PLEKHA1Q9HB21 404 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 ZANQ9Y493 2812 aa21.67■■□□□ 1.06
TRIM28-204ENST00000594806 PPIAL4EA0A075B759 164 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 LOC107986453A0A1B0GWG9 222 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 OR5B21A6NL26 309 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 B4DSR2 109 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 PPIAL4DF5H284 164 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 CYB5R3P00387 301 aaPredicted RBP21.66■■□□□ 1.06
TRIM28-204ENST00000594806 PPIAL4FP0DN26 164 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 CFHR2P36980 270 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 ETV1P50549 477 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 NANOS3P60323 173 aaKnown RBP21.66■■□□□ 1.06
TRIM28-204ENST00000594806 GNG3P63215 75 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 ZNF154Q13106 437 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 ODF4Q2M2E3 257 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 C6orf141Q5SZD1 244 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 HPSE2Q8WWQ2 592 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 MSI2Q96DH6 328 aaKnown RBP21.66■■□□□ 1.06
TRIM28-204ENST00000594806 ZNF665Q9H7R5 613 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 TRIM36Q9NQ86 728 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 C1orf123Q9NWV4 160 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 SCN3BQ9NY72 215 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 RAB26Q9ULW5 256 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 PPIAL4AQ9Y536 164 aa21.66■■□□□ 1.06
TRIM28-204ENST00000594806 TMEM212A6NML5 194 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 OR4C45A6NMZ5 311 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 XPNPEP2O43895 674 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 IGHV2-5P01817 119 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 IL2RGP31785 369 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 ZMYND11Q15326 602 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 MOB3CQ70IA8 216 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 WDR86Q86TI4 376 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 STX19Q8N4C7 294 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 OR52N1Q8NH53 320 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 TECTBQ96PL2 329 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 PPP1R3EQ9H7J1 279 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 FKBP14Q9NWM8 211 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 HHLA2Q9UM44 414 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 PCDHB10Q9UN67 800 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 MALRD1Q5VYJ5 2156 aa21.65■■□□□ 1.06
TRIM28-204ENST00000594806 SERPINA3P01011 423 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 KCNJ8Q15842 424 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 PLCXD3Q63HM9 321 aa21.64■■□□□ 1.05
TRIM28-204ENST00000594806 FAM166AQ6J272 317 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms