RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 GPRIN2O60269 458 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 MED6O75586 246 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 JMJD7P0C870 316 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 OR8G3PP0DMU2 310 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 NR2C1P13056 603 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 IL11P20809 199 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 NANOS3P60323 173 aaKnown RBP13.61□□□□□ -0.23
PNKP-204ENST00000594661 SPEM2Q0P670 501 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 SGCBQ16585 318 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 ZNF684Q5T5D7 378 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 STPG1Q5TH74 334 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 OR10D4PQ8NGN7 298 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 M1APQ8TC57 530 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 SLITRK2Q9H156 845 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 HRH4Q9H3N8 390 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 BCO1Q9HAY6 547 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 TMEM9BQ9NQ34 198 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 ZDHHC8Q9ULC8 765 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 CHCHD2Q9Y6H1 151 aaPredicted RBP13.61□□□□□ -0.23
PNKP-204ENST00000594661 ALPK2Q86TB3 2170 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 IGLV3-32A0A0A0MS00 114 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 NSG1A0A0A6YYJ2 146 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 C9orf172C9J069 976 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 XKRYO14609 159 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 AHSA1O95433 338 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 F10P00742 488 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 TACSTD2P09758 323 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 SRMP19623 302 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 TCN2P20062 427 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 DVL1P1P54792 670 aaPredicted RBP13.61□□□□□ -0.23
PNKP-204ENST00000594661 OR7A5Q15622 319 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 PRAMEF20Q5VT98 475 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 SPNS3Q6ZMD2 512 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 PPP1R32Q7Z5V6 425 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 CDC20BQ86Y33 519 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 FAM24BQ8N5W8 94 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 OR6N2Q8NGY6 317 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 LIN37Q96GY3 246 aaPredicted RBP13.61□□□□□ -0.23
PNKP-204ENST00000594661 KIRREL1Q96J84 757 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 YPEL4Q96NS1 127 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 S100A13Q99584 98 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 SULT4A1Q9BR01 284 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 PRO1933Q9H354 126 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 LAMP5Q9UJQ1 280 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 TCFL5Q9UL49 500 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 ZNF281Q9Y2X9 895 aa13.61□□□□□ -0.23
PNKP-204ENST00000594661 FTCDNL1E5RQL4 147 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 GPANK1O95872 356 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 APOBEC1P41238 236 aaKnown RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 RAP1AP62834 184 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 PLPPR5Q32ZL2 321 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 LRRC37A5PQ49AS3 106 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 OR5R1Q8NH85 324 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 ZNF417Q8TAU3 575 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 RPS4Y2Q8TD47 263 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 R3HDM4Q96D70 268 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 ZNF587Q96SQ5 575 aaPredicted RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 MICU1Q9BPX6 476 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 ZPBPQ9BS86 351 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 DDA1Q9BW61 102 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 WDR76Q9H967 626 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 FN3KRPQ9HA64 309 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 NOX4Q9NPH5 578 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 FOXJ2Q9P0K8 574 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 MRM2Q9UI43 246 aaKnown RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 ETV2O00321 342 aaPredicted RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 EFNA2O43921 213 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 DXOO77932 396 aaKnown RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 ZFPL1O95159 310 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 OR6A2O95222 327 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 PMP2P02689 132 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 SNRNP70P08621 437 aaKnown RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 MPZP25189 248 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 MSX1P28360 303 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 OTX2P32243 289 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 RPS27P42677 84 aaKnown RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 PRKXP51817 358 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 ACKR1Q16570 336 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 SUMF1Q8NBK3 374 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 OR2M3Q8NG83 312 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 OR10J5Q8NHC4 309 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 POC1BQ8TC44 478 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 ADAMTS17Q8TE56 1095 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 RNF166Q96A37 237 aaPredicted RBP13.6□□□□□ -0.23
PNKP-204ENST00000594661 AKR1E2Q96JD6 320 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 IP6K3Q96PC2 410 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 INTS14Q96SY0 518 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 NDUFAF3Q9BU61 184 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 SPRY4Q9C004 299 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 PTGES2Q9H7Z7 377 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 IKZF2Q9UKS7 526 aa13.6□□□□□ -0.23
PNKP-204ENST00000594661 CACNA1HO95180 2353 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 SDK2Q58EX2 2172 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 A8MWP6 167 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 PLPP3O14495 311 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 PIN1P1O15428 100 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 XRCC3O43542 346 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 NME2P22392 152 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 CD34P28906 385 aa13.59□□□□□ -0.23
PNKP-204ENST00000594661 CD80P33681 288 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms