RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 RTL8AQ9BWD3 113 aa12.21□□□□□ -0.45
VRK3-206ENST00000594090 FGF23Q9GZV9 251 aaPredicted RBP12.21□□□□□ -0.45
VRK3-206ENST00000594090 VCXQ9H320 206 aa12.21□□□□□ -0.45
VRK3-206ENST00000594090 PATZ1Q9HBE1 687 aaKnown RBP12.21□□□□□ -0.45
VRK3-206ENST00000594090 MRPS18AQ9NVS2 196 aaKnown RBP12.21□□□□□ -0.45
VRK3-206ENST00000594090 HIF1ANQ9NWT6 349 aa12.21□□□□□ -0.45
VRK3-206ENST00000594090 C1orf123Q9NWV4 160 aa12.21□□□□□ -0.45
VRK3-206ENST00000594090 MYRFQ9Y2G1 1151 aa12.21□□□□□ -0.45
VRK3-206ENST00000594090 RPL36Q9Y3U8 105 aaKnown RBP12.21□□□□□ -0.45
VRK3-206ENST00000594090 PPIAL4AQ9Y536 164 aa12.21□□□□□ -0.45
VRK3-206ENST00000594090 V9GYS6 101 aa12.21□□□□□ -0.45
VRK3-206ENST00000594090 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 hCG_1807616A0A1W2PRN6 198 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 TMEM210A6NLX4 147 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 FADS2O95864 444 aaKnown RBP12.2□□□□□ -0.46
VRK3-206ENST00000594090 CCL1P22362 96 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 THBS2P35442 1172 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 CAPGP40121 348 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 PSMB10P40306 273 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 OR12D2P58182 307 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 IL18R1Q13478 541 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 GALEQ14376 348 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 CHRFAM7AQ494W8 412 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 OR52I1Q8NGK6 324 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 MRPL48Q96GC5 212 aaKnown RBP12.2□□□□□ -0.46
VRK3-206ENST00000594090 C4orf36Q96KX1 117 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 TMEM246Q9BRR3 403 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 ALG8Q9BVK2 526 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 SHARPINQ9H0F6 387 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 TLNRD1Q9H1K6 362 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 RNPEPL1Q9HAU8 725 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 TMEM165Q9HC07 324 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 LPAR3Q9UBY5 353 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 ENPP5Q9UJA9 477 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 PIGLQ9Y2B2 252 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 DHRS7CA6NNS2 312 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 H0YAE9 185 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 J3QLW9 94 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 PLPP2O43688 288 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 GNAO1P09471 354 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 ZNF19P17023 458 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 PCMT1P22061 227 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 ODF4Q2M2E3 257 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 CEP78Q5JTW2 689 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 FAM120AOSQ5T036 256 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 WDR82Q6UXN9 313 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 DOK3Q7L591 496 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 LHFPL3Q86UP9 236 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 GCSAMQ8N6F7 178 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 C19orf18Q8NEA5 215 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 OR14K1Q8NGZ2 314 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 OR2G2Q8NGZ5 317 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 PELI1Q96FA3 418 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 RNF170Q96K19 258 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 INPP5EQ9NRR6 644 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 ERVK13-1Q9NX77 482 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 HSPE1-MOB4S4R3N1 261 aa12.2□□□□□ -0.46
VRK3-206ENST00000594090 NF1P21359 2839 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 A0A1B0GVI7 797 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 A8MXK9 166 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 SYT7O43581 403 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 NRASP01111 189 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 LHBP01229 141 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 UBCP0CG48 685 aaKnown RBP12.19□□□□□ -0.46
VRK3-206ENST00000594090 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
VRK3-206ENST00000594090 CD80P33681 288 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 SEC61A1P61619 476 aaKnown RBP12.19□□□□□ -0.46
VRK3-206ENST00000594090 CEACAM21Q3KPI0 293 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 KLHL22Q53GT1 634 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 FAM76BQ5HYJ3 339 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 PLCXD3Q63HM9 321 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 FDX2Q6P4F2 183 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 DCDC5Q6ZRR9 648 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 IL17RELQ6ZVW7 336 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 KCTD8Q6ZWB6 473 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 BOLLQ8N9W6 283 aaKnown RBP12.19□□□□□ -0.46
VRK3-206ENST00000594090 DEFB108BQ8NET1 73 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 LRRC29Q8WV35 223 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 NRG4Q8WWG1 115 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 HIST1H2AAQ96QV6 131 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 MYCBPQ99417 103 aaPredicted RBP12.19□□□□□ -0.46
VRK3-206ENST00000594090 ZNF649Q9BS31 505 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 JAM3Q9BX67 310 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 BEX2Q9BXY8 128 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 METTL17Q9H7H0 456 aaPredicted RBP12.19□□□□□ -0.46
VRK3-206ENST00000594090 FGF20Q9NP95 211 aaPredicted RBP12.19□□□□□ -0.46
VRK3-206ENST00000594090 MIOXQ9UGB7 285 aa12.19□□□□□ -0.46
VRK3-206ENST00000594090 LOC107986453A0A1B0GWG9 222 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 OOEPA6NGQ2 149 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 OR5B21A6NL26 309 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 C3orf80F5H4A9 247 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 H3BSH0 61 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 LGALS8O00214 317 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 CDIPTO14735 213 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 FOXH1O75593 365 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 HTR1AP08908 422 aa12.18□□□□□ -0.46
VRK3-206ENST00000594090 WNT2P09544 360 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms